Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSL2Q9HCI7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
MSL2Q9HCI7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.34■□□□□ 0.69
MSL2Q9HCI7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSL2Q9HCI7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSL2Q9HCI7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
MSL2Q9HCI7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSL2Q9HCI7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSL2Q9HCI7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MSL2Q9HCI7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
MSL2Q9HCI7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MSL2Q9HCI7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MSL2Q9HCI7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
MSL2Q9HCI7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MSL2Q9HCI7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.33■□□□□ 0.69
MSL2Q9HCI7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.33■□□□□ 0.68
MSL2Q9HCI7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.33■□□□□ 0.68
MSL2Q9HCI7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.33■□□□□ 0.68
MSL2Q9HCI7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.33■□□□□ 0.68
MSL2Q9HCI7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.33■□□□□ 0.68
MSL2Q9HCI7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.33■□□□□ 0.68
MSL2Q9HCI7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
MSL2Q9HCI7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MSL2Q9HCI7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MSL2Q9HCI7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MSL2Q9HCI7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MSL2Q9HCI7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.32■□□□□ 0.68
MSL2Q9HCI7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
MSL2Q9HCI7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MSL2Q9HCI7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MSL2Q9HCI7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.32■□□□□ 0.68
MSL2Q9HCI7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MSL2Q9HCI7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MSL2Q9HCI7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.32■□□□□ 0.68
MSL2Q9HCI7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MSL2Q9HCI7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MSL2Q9HCI7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MSL2Q9HCI7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
MSL2Q9HCI7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MSL2Q9HCI7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
MSL2Q9HCI7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MSL2Q9HCI7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.31■□□□□ 0.68
MSL2Q9HCI7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MSL2Q9HCI7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MSL2Q9HCI7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MSL2Q9HCI7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.31■□□□□ 0.68
MSL2Q9HCI7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.31■□□□□ 0.68
MSL2Q9HCI7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.31■□□□□ 0.68
MSL2Q9HCI7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MSL2Q9HCI7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
MSL2Q9HCI7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
MSL2Q9HCI7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.3■□□□□ 0.68
MSL2Q9HCI7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MSL2Q9HCI7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MSL2Q9HCI7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.3■□□□□ 0.68
MSL2Q9HCI7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.3■□□□□ 0.68
MSL2Q9HCI7 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.3■□□□□ 0.68
MSL2Q9HCI7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MSL2Q9HCI7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
MSL2Q9HCI7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.3■□□□□ 0.68
MSL2Q9HCI7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MSL2Q9HCI7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSL2Q9HCI7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSL2Q9HCI7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSL2Q9HCI7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSL2Q9HCI7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
MSL2Q9HCI7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSL2Q9HCI7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MSL2Q9HCI7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.29■□□□□ 0.68
MSL2Q9HCI7 AC131281.2-201ENST00000520478 145 ntBASIC19.29■□□□□ 0.68
MSL2Q9HCI7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSL2Q9HCI7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MSL2Q9HCI7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
MSL2Q9HCI7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSL2Q9HCI7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.29■□□□□ 0.68
MSL2Q9HCI7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSL2Q9HCI7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
MSL2Q9HCI7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MSL2Q9HCI7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MSL2Q9HCI7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.28■□□□□ 0.68
MSL2Q9HCI7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MSL2Q9HCI7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MSL2Q9HCI7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MSL2Q9HCI7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.28■□□□□ 0.68
MSL2Q9HCI7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
MSL2Q9HCI7 AC009102.2-201ENST00000606772 1639 ntBASIC19.28■□□□□ 0.68
MSL2Q9HCI7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MSL2Q9HCI7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MSL2Q9HCI7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MSL2Q9HCI7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MSL2Q9HCI7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MSL2Q9HCI7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MSL2Q9HCI7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MSL2Q9HCI7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MSL2Q9HCI7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.27■□□□□ 0.68
MSL2Q9HCI7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
MSL2Q9HCI7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MSL2Q9HCI7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.27■□□□□ 0.68
MSL2Q9HCI7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MSL2Q9HCI7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms