Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.27■■□□□ 1.16
POPDC3Q9HBV1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
POPDC3Q9HBV1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
POPDC3Q9HBV1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
POPDC3Q9HBV1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
POPDC3Q9HBV1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.26■■□□□ 1.15
POPDC3Q9HBV1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
POPDC3Q9HBV1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
POPDC3Q9HBV1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
POPDC3Q9HBV1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.26■■□□□ 1.15
POPDC3Q9HBV1 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.25■■□□□ 1.15
POPDC3Q9HBV1 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.25■■□□□ 1.15
POPDC3Q9HBV1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
POPDC3Q9HBV1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
POPDC3Q9HBV1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
POPDC3Q9HBV1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.25■■□□□ 1.15
POPDC3Q9HBV1 AC079630.1-202ENST00000618127 1840 ntBASIC22.25■■□□□ 1.15
POPDC3Q9HBV1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.25■■□□□ 1.15
POPDC3Q9HBV1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
POPDC3Q9HBV1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.25■■□□□ 1.15
POPDC3Q9HBV1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.25■■□□□ 1.15
POPDC3Q9HBV1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.25■■□□□ 1.15
POPDC3Q9HBV1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.25■■□□□ 1.15
POPDC3Q9HBV1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
POPDC3Q9HBV1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
POPDC3Q9HBV1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
POPDC3Q9HBV1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
POPDC3Q9HBV1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
POPDC3Q9HBV1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
POPDC3Q9HBV1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
POPDC3Q9HBV1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.24■■□□□ 1.15
POPDC3Q9HBV1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.24■■□□□ 1.15
POPDC3Q9HBV1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
POPDC3Q9HBV1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
POPDC3Q9HBV1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
POPDC3Q9HBV1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
POPDC3Q9HBV1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.23■■□□□ 1.15
POPDC3Q9HBV1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
POPDC3Q9HBV1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.23■■□□□ 1.15
POPDC3Q9HBV1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.23■■□□□ 1.15
POPDC3Q9HBV1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
POPDC3Q9HBV1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
POPDC3Q9HBV1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
POPDC3Q9HBV1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
POPDC3Q9HBV1 AC021242.3-201ENST00000607598 1377 ntBASIC22.23■■□□□ 1.15
POPDC3Q9HBV1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
POPDC3Q9HBV1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
POPDC3Q9HBV1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
POPDC3Q9HBV1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.22■■□□□ 1.15
POPDC3Q9HBV1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
POPDC3Q9HBV1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.22■■□□□ 1.15
POPDC3Q9HBV1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
POPDC3Q9HBV1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
POPDC3Q9HBV1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
POPDC3Q9HBV1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.22■■□□□ 1.15
POPDC3Q9HBV1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
POPDC3Q9HBV1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
POPDC3Q9HBV1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
POPDC3Q9HBV1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
POPDC3Q9HBV1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
POPDC3Q9HBV1 MIR6722-201ENST00000617286 78 ntBASIC22.21■■□□□ 1.15
POPDC3Q9HBV1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.21■■□□□ 1.15
POPDC3Q9HBV1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
POPDC3Q9HBV1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
POPDC3Q9HBV1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
POPDC3Q9HBV1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
POPDC3Q9HBV1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.2■■□□□ 1.15
POPDC3Q9HBV1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
POPDC3Q9HBV1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
POPDC3Q9HBV1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
POPDC3Q9HBV1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.2■■□□□ 1.14
POPDC3Q9HBV1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
POPDC3Q9HBV1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
POPDC3Q9HBV1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
POPDC3Q9HBV1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.2■■□□□ 1.14
POPDC3Q9HBV1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
POPDC3Q9HBV1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.2■■□□□ 1.14
POPDC3Q9HBV1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
POPDC3Q9HBV1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
POPDC3Q9HBV1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
POPDC3Q9HBV1 BX664725.1-201ENST00000438252 379 ntBASIC22.19■■□□□ 1.14
POPDC3Q9HBV1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.19■■□□□ 1.14
POPDC3Q9HBV1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
POPDC3Q9HBV1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.19■■□□□ 1.14
POPDC3Q9HBV1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
POPDC3Q9HBV1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
POPDC3Q9HBV1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
POPDC3Q9HBV1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
POPDC3Q9HBV1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
POPDC3Q9HBV1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
POPDC3Q9HBV1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.18■■□□□ 1.14
POPDC3Q9HBV1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
POPDC3Q9HBV1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.18■■□□□ 1.14
POPDC3Q9HBV1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
POPDC3Q9HBV1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
POPDC3Q9HBV1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.18■■□□□ 1.14
POPDC3Q9HBV1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
POPDC3Q9HBV1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
POPDC3Q9HBV1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
POPDC3Q9HBV1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms