Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.15■■□□□ 1.62
ATP6V0A4Q9HBG4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ATP6V0A4Q9HBG4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.14■■□□□ 1.62
ATP6V0A4Q9HBG4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ATP6V0A4Q9HBG4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.62
ATP6V0A4Q9HBG4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.14■■□□□ 1.62
ATP6V0A4Q9HBG4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
ATP6V0A4Q9HBG4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
ATP6V0A4Q9HBG4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
ATP6V0A4Q9HBG4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
ATP6V0A4Q9HBG4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ATP6V0A4Q9HBG4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.13■■□□□ 1.61
ATP6V0A4Q9HBG4 UNC93B3-201ENST00000308076 687 ntBASIC25.13■■□□□ 1.61
ATP6V0A4Q9HBG4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
ATP6V0A4Q9HBG4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ATP6V0A4Q9HBG4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
ATP6V0A4Q9HBG4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ATP6V0A4Q9HBG4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.12■■□□□ 1.61
ATP6V0A4Q9HBG4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.12■■□□□ 1.61
ATP6V0A4Q9HBG4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
ATP6V0A4Q9HBG4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
ATP6V0A4Q9HBG4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.12■■□□□ 1.61
ATP6V0A4Q9HBG4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ATP6V0A4Q9HBG4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
ATP6V0A4Q9HBG4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.12■■□□□ 1.61
ATP6V0A4Q9HBG4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ATP6V0A4Q9HBG4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ATP6V0A4Q9HBG4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ATP6V0A4Q9HBG4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ATP6V0A4Q9HBG4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ATP6V0A4Q9HBG4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ATP6V0A4Q9HBG4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ATP6V0A4Q9HBG4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ATP6V0A4Q9HBG4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
ATP6V0A4Q9HBG4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ATP6V0A4Q9HBG4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ATP6V0A4Q9HBG4 AL136162.1-201ENST00000607711 1078 ntBASIC25.1■■□□□ 1.61
ATP6V0A4Q9HBG4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ATP6V0A4Q9HBG4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ATP6V0A4Q9HBG4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ATP6V0A4Q9HBG4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ATP6V0A4Q9HBG4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ATP6V0A4Q9HBG4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ATP6V0A4Q9HBG4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ATP6V0A4Q9HBG4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
ATP6V0A4Q9HBG4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ATP6V0A4Q9HBG4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.09■■□□□ 1.61
ATP6V0A4Q9HBG4 AC093323.1-202ENST00000635031 2045 ntBASIC25.08■■□□□ 1.61
ATP6V0A4Q9HBG4 C17orf82-201ENST00000623772 1530 ntBASIC25.08■■□□□ 1.61
ATP6V0A4Q9HBG4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ATP6V0A4Q9HBG4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ATP6V0A4Q9HBG4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.08■■□□□ 1.61
ATP6V0A4Q9HBG4 AC142381.2-201ENST00000566120 298 ntBASIC25.08■■□□□ 1.61
ATP6V0A4Q9HBG4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.08■■□□□ 1.61
ATP6V0A4Q9HBG4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.08■■□□□ 1.61
ATP6V0A4Q9HBG4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.08■■□□□ 1.61
ATP6V0A4Q9HBG4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
ATP6V0A4Q9HBG4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ATP6V0A4Q9HBG4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
ATP6V0A4Q9HBG4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
ATP6V0A4Q9HBG4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.07■■□□□ 1.6
ATP6V0A4Q9HBG4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
ATP6V0A4Q9HBG4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.07■■□□□ 1.6
ATP6V0A4Q9HBG4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.07■■□□□ 1.6
ATP6V0A4Q9HBG4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ATP6V0A4Q9HBG4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ATP6V0A4Q9HBG4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.07■■□□□ 1.6
ATP6V0A4Q9HBG4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ATP6V0A4Q9HBG4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.07■■□□□ 1.6
ATP6V0A4Q9HBG4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
ATP6V0A4Q9HBG4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
ATP6V0A4Q9HBG4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ATP6V0A4Q9HBG4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
ATP6V0A4Q9HBG4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
ATP6V0A4Q9HBG4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.06■■□□□ 1.6
ATP6V0A4Q9HBG4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ATP6V0A4Q9HBG4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ATP6V0A4Q9HBG4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
ATP6V0A4Q9HBG4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ATP6V0A4Q9HBG4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.05■■□□□ 1.6
ATP6V0A4Q9HBG4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ATP6V0A4Q9HBG4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
ATP6V0A4Q9HBG4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ATP6V0A4Q9HBG4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
ATP6V0A4Q9HBG4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
ATP6V0A4Q9HBG4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ATP6V0A4Q9HBG4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.05■■□□□ 1.6
ATP6V0A4Q9HBG4 ABCB10P4-201ENST00000566803 2184 ntBASIC25.05■■□□□ 1.6
ATP6V0A4Q9HBG4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
ATP6V0A4Q9HBG4 AC135279.3-201ENST00000610945 1311 ntBASIC25.05■■□□□ 1.6
ATP6V0A4Q9HBG4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ATP6V0A4Q9HBG4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ATP6V0A4Q9HBG4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ATP6V0A4Q9HBG4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ATP6V0A4Q9HBG4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ATP6V0A4Q9HBG4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
ATP6V0A4Q9HBG4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
ATP6V0A4Q9HBG4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.03■■□□□ 1.6
ATP6V0A4Q9HBG4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ATP6V0A4Q9HBG4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms