Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SEC61A2Q9H9S3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SEC61A2Q9H9S3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SEC61A2Q9H9S3 TSPY9P-201ENST00000440215 945 ntBASIC20.15■□□□□ 0.82
SEC61A2Q9H9S3 TSPY11P-201ENST00000442607 1045 ntBASIC20.15■□□□□ 0.82
SEC61A2Q9H9S3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.15■□□□□ 0.82
SEC61A2Q9H9S3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SEC61A2Q9H9S3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SEC61A2Q9H9S3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SEC61A2Q9H9S3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
SEC61A2Q9H9S3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SEC61A2Q9H9S3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEC61A2Q9H9S3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.14■□□□□ 0.81
SEC61A2Q9H9S3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SEC61A2Q9H9S3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEC61A2Q9H9S3 UNC93B8-201ENST00000511903 705 ntBASIC20.14■□□□□ 0.81
SEC61A2Q9H9S3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.14■□□□□ 0.81
SEC61A2Q9H9S3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEC61A2Q9H9S3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEC61A2Q9H9S3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 AC004448.1-201ENST00000458332 883 ntBASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEC61A2Q9H9S3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A2Q9H9S3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A2Q9H9S3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A2Q9H9S3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SEC61A2Q9H9S3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A2Q9H9S3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A2Q9H9S3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A2Q9H9S3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.12■□□□□ 0.81
SEC61A2Q9H9S3 AC092028.1-203ENST00000608262 953 ntBASIC20.12■□□□□ 0.81
SEC61A2Q9H9S3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A2Q9H9S3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.12■□□□□ 0.81
SEC61A2Q9H9S3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A2Q9H9S3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SEC61A2Q9H9S3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A2Q9H9S3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A2Q9H9S3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A2Q9H9S3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A2Q9H9S3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A2Q9H9S3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SEC61A2Q9H9S3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SEC61A2Q9H9S3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.11■□□□□ 0.81
SEC61A2Q9H9S3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SEC61A2Q9H9S3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SEC61A2Q9H9S3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SEC61A2Q9H9S3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SEC61A2Q9H9S3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SEC61A2Q9H9S3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.11■□□□□ 0.81
SEC61A2Q9H9S3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SEC61A2Q9H9S3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.11■□□□□ 0.81
SEC61A2Q9H9S3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SEC61A2Q9H9S3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.11■□□□□ 0.81
SEC61A2Q9H9S3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.1■□□□□ 0.81
SEC61A2Q9H9S3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SEC61A2Q9H9S3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SEC61A2Q9H9S3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
SEC61A2Q9H9S3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.1■□□□□ 0.81
SEC61A2Q9H9S3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.1■□□□□ 0.81
SEC61A2Q9H9S3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SEC61A2Q9H9S3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SEC61A2Q9H9S3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.1■□□□□ 0.81
SEC61A2Q9H9S3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SEC61A2Q9H9S3 AC133561.1-201ENST00000568600 2415 ntBASIC20.1■□□□□ 0.81
SEC61A2Q9H9S3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEC61A2Q9H9S3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SEC61A2Q9H9S3 DUSP8P5-201ENST00000422884 1815 ntBASIC20.09■□□□□ 0.81
SEC61A2Q9H9S3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEC61A2Q9H9S3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEC61A2Q9H9S3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEC61A2Q9H9S3 AL356441.2-201ENST00000443009 864 ntBASIC20.09■□□□□ 0.81
SEC61A2Q9H9S3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEC61A2Q9H9S3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SEC61A2Q9H9S3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEC61A2Q9H9S3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SEC61A2Q9H9S3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEC61A2Q9H9S3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEC61A2Q9H9S3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SEC61A2Q9H9S3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.09■□□□□ 0.81
SEC61A2Q9H9S3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.81
SEC61A2Q9H9S3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SEC61A2Q9H9S3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.08■□□□□ 0.81
SEC61A2Q9H9S3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SEC61A2Q9H9S3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms