Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC28.49■■■□□ 2.15
CHMP4BQ9H444 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CHMP4BQ9H444 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC28.49■■■□□ 2.15
CHMP4BQ9H444 MIR4787-201ENST00000607364 84 ntBASIC28.49■■■□□ 2.15
CHMP4BQ9H444 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CHMP4BQ9H444 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.49■■■□□ 2.15
CHMP4BQ9H444 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CHMP4BQ9H444 CASK-201ENST00000378154 2494 ntTSL 5 BASIC28.48■■■□□ 2.15
CHMP4BQ9H444 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CHMP4BQ9H444 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC28.48■■■□□ 2.15
CHMP4BQ9H444 AC009299.2-201ENST00000482477 511 ntBASIC28.48■■■□□ 2.15
CHMP4BQ9H444 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
CHMP4BQ9H444 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHMP4BQ9H444 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC28.47■■■□□ 2.15
CHMP4BQ9H444 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHMP4BQ9H444 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC28.47■■■□□ 2.15
CHMP4BQ9H444 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHMP4BQ9H444 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC28.47■■■□□ 2.15
CHMP4BQ9H444 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHMP4BQ9H444 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHMP4BQ9H444 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC28.47■■■□□ 2.15
CHMP4BQ9H444 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CHMP4BQ9H444 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC28.46■■■□□ 2.15
CHMP4BQ9H444 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CHMP4BQ9H444 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC28.46■■■□□ 2.15
CHMP4BQ9H444 AC239859.2-201ENST00000444165 318 ntBASIC28.46■■■□□ 2.15
CHMP4BQ9H444 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CHMP4BQ9H444 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
CHMP4BQ9H444 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CHMP4BQ9H444 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
CHMP4BQ9H444 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
CHMP4BQ9H444 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC28.45■■■□□ 2.15
CHMP4BQ9H444 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
CHMP4BQ9H444 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
CHMP4BQ9H444 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CHMP4BQ9H444 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CHMP4BQ9H444 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
CHMP4BQ9H444 H19-210ENST00000439725 1929 ntTSL 2 BASIC28.45■■■□□ 2.14
CHMP4BQ9H444 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CHMP4BQ9H444 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CHMP4BQ9H444 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.44■■■□□ 2.14
CHMP4BQ9H444 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC28.44■■■□□ 2.14
CHMP4BQ9H444 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CHMP4BQ9H444 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
CHMP4BQ9H444 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC28.44■■■□□ 2.14
CHMP4BQ9H444 MTDHP2-201ENST00000601468 714 ntBASIC28.44■■■□□ 2.14
CHMP4BQ9H444 AL451085.2-201ENST00000605085 799 ntBASIC28.44■■■□□ 2.14
CHMP4BQ9H444 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC28.44■■■□□ 2.14
CHMP4BQ9H444 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CHMP4BQ9H444 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CHMP4BQ9H444 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CHMP4BQ9H444 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC28.43■■■□□ 2.14
CHMP4BQ9H444 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
CHMP4BQ9H444 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC28.43■■■□□ 2.14
CHMP4BQ9H444 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC28.43■■■□□ 2.14
CHMP4BQ9H444 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC28.43■■■□□ 2.14
CHMP4BQ9H444 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC28.43■■■□□ 2.14
CHMP4BQ9H444 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC28.43■■■□□ 2.14
CHMP4BQ9H444 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC28.43■■■□□ 2.14
CHMP4BQ9H444 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CHMP4BQ9H444 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC28.43■■■□□ 2.14
CHMP4BQ9H444 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
CHMP4BQ9H444 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
CHMP4BQ9H444 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CHMP4BQ9H444 AC012676.1-201ENST00000574705 1949 ntBASIC28.42■■■□□ 2.14
CHMP4BQ9H444 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC28.42■■■□□ 2.14
CHMP4BQ9H444 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHMP4BQ9H444 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHMP4BQ9H444 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHMP4BQ9H444 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHMP4BQ9H444 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CHMP4BQ9H444 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC28.42■■■□□ 2.14
CHMP4BQ9H444 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHMP4BQ9H444 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
CHMP4BQ9H444 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CHMP4BQ9H444 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CHMP4BQ9H444 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
CHMP4BQ9H444 LTK-203ENST00000453182 2412 ntTSL 2 BASIC28.41■■■□□ 2.14
CHMP4BQ9H444 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
CHMP4BQ9H444 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC28.4■■■□□ 2.14
CHMP4BQ9H444 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC28.4■■■□□ 2.14
CHMP4BQ9H444 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CHMP4BQ9H444 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC28.4■■■□□ 2.14
CHMP4BQ9H444 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CHMP4BQ9H444 CLTA-206ENST00000466396 695 ntTSL 2 BASIC28.4■■■□□ 2.14
CHMP4BQ9H444 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CHMP4BQ9H444 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
CHMP4BQ9H444 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CHMP4BQ9H444 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC28.39■■■□□ 2.14
CHMP4BQ9H444 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
CHMP4BQ9H444 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC28.39■■■□□ 2.14
CHMP4BQ9H444 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CHMP4BQ9H444 EXOG-217ENST00000630638 197 ntTSL 5 BASIC28.39■■■□□ 2.14
CHMP4BQ9H444 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.13
CHMP4BQ9H444 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
CHMP4BQ9H444 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
CHMP4BQ9H444 AC079630.1-202ENST00000618127 1840 ntBASIC28.39■■■□□ 2.13
CHMP4BQ9H444 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
CHMP4BQ9H444 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CHMP4BQ9H444 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms