Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MED28Q9H204 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.25■□□□□ 0.67
MED28Q9H204 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.25■□□□□ 0.67
MED28Q9H204 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MED28Q9H204 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MED28Q9H204 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MED28Q9H204 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
MED28Q9H204 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.25■□□□□ 0.67
MED28Q9H204 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MED28Q9H204 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MED28Q9H204 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MED28Q9H204 ESRRAP2-201ENST00000418437 1549 ntBASIC19.25■□□□□ 0.67
MED28Q9H204 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
MED28Q9H204 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MED28Q9H204 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MED28Q9H204 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
MED28Q9H204 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MED28Q9H204 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MED28Q9H204 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MED28Q9H204 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MED28Q9H204 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MED28Q9H204 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MED28Q9H204 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
MED28Q9H204 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
MED28Q9H204 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MED28Q9H204 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MED28Q9H204 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MED28Q9H204 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
MED28Q9H204 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MED28Q9H204 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
MED28Q9H204 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MED28Q9H204 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.23■□□□□ 0.67
MED28Q9H204 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
MED28Q9H204 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MED28Q9H204 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MED28Q9H204 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MED28Q9H204 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
MED28Q9H204 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
MED28Q9H204 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
MED28Q9H204 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MED28Q9H204 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MED28Q9H204 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MED28Q9H204 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MED28Q9H204 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.22■□□□□ 0.67
MED28Q9H204 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MED28Q9H204 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MED28Q9H204 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MED28Q9H204 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MED28Q9H204 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MED28Q9H204 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.21■□□□□ 0.67
MED28Q9H204 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MED28Q9H204 C11orf96-202ENST00000528572 1834 ntBASIC19.21■□□□□ 0.67
MED28Q9H204 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MED28Q9H204 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MED28Q9H204 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.21■□□□□ 0.67
MED28Q9H204 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MED28Q9H204 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.21■□□□□ 0.67
MED28Q9H204 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.21■□□□□ 0.67
MED28Q9H204 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.21■□□□□ 0.67
MED28Q9H204 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MED28Q9H204 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MED28Q9H204 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MED28Q9H204 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
MED28Q9H204 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.2■□□□□ 0.66
MED28Q9H204 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MED28Q9H204 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MED28Q9H204 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.2■□□□□ 0.66
MED28Q9H204 RNF165-205ENST00000588679 2904 ntBASIC19.2■□□□□ 0.66
MED28Q9H204 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.2■□□□□ 0.66
MED28Q9H204 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MED28Q9H204 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MED28Q9H204 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MED28Q9H204 FBXW4P1-201ENST00000426721 2239 ntBASIC19.2■□□□□ 0.66
MED28Q9H204 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MED28Q9H204 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
MED28Q9H204 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MED28Q9H204 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
MED28Q9H204 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.2■□□□□ 0.66
MED28Q9H204 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MED28Q9H204 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MED28Q9H204 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.19■□□□□ 0.66
MED28Q9H204 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MED28Q9H204 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.19■□□□□ 0.66
MED28Q9H204 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.19■□□□□ 0.66
MED28Q9H204 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MED28Q9H204 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MED28Q9H204 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
MED28Q9H204 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.18■□□□□ 0.66
MED28Q9H204 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
MED28Q9H204 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MED28Q9H204 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
MED28Q9H204 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MED28Q9H204 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
MED28Q9H204 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.18■□□□□ 0.66
MED28Q9H204 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MED28Q9H204 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MED28Q9H204 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MED28Q9H204 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MED28Q9H204 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MED28Q9H204 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms