Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.09■□□□□ 0.81
TRAF4Q9BUZ4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAF4Q9BUZ4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAF4Q9BUZ4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAF4Q9BUZ4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.08■□□□□ 0.81
TRAF4Q9BUZ4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
TRAF4Q9BUZ4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.08■□□□□ 0.81
TRAF4Q9BUZ4 MTDHP2-201ENST00000601468 714 ntBASIC20.08■□□□□ 0.81
TRAF4Q9BUZ4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRAF4Q9BUZ4 SLC25A24-204ENST00000569674 2357 ntBASIC20.08■□□□□ 0.8
TRAF4Q9BUZ4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAF4Q9BUZ4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAF4Q9BUZ4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAF4Q9BUZ4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRAF4Q9BUZ4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
TRAF4Q9BUZ4 C9orf163-202ENST00000624034 2573 ntBASIC20.07■□□□□ 0.8
TRAF4Q9BUZ4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF4Q9BUZ4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF4Q9BUZ4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAF4Q9BUZ4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAF4Q9BUZ4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAF4Q9BUZ4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAF4Q9BUZ4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAF4Q9BUZ4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAF4Q9BUZ4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF4Q9BUZ4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF4Q9BUZ4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF4Q9BUZ4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF4Q9BUZ4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF4Q9BUZ4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TRAF4Q9BUZ4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAF4Q9BUZ4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF4Q9BUZ4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAF4Q9BUZ4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.06■□□□□ 0.8
TRAF4Q9BUZ4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.06■□□□□ 0.8
TRAF4Q9BUZ4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.06■□□□□ 0.8
TRAF4Q9BUZ4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF4Q9BUZ4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAF4Q9BUZ4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.06■□□□□ 0.8
TRAF4Q9BUZ4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 AC233723.2-201ENST00000623798 2106 ntBASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 MIR6724-1-201ENST00000616420 92 ntBASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 MIR6724-2-201ENST00000616483 92 ntBASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 MIR6724-4-201ENST00000617390 92 ntBASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 MIR6724-3-201ENST00000622482 92 ntBASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF4Q9BUZ4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRAF4Q9BUZ4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF4Q9BUZ4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF4Q9BUZ4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF4Q9BUZ4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF4Q9BUZ4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.04■□□□□ 0.8
TRAF4Q9BUZ4 AL117332.1-201ENST00000622628 974 ntBASIC20.04■□□□□ 0.8
TRAF4Q9BUZ4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF4Q9BUZ4 AF131216.4-201ENST00000638924 1588 ntBASIC20.04■□□□□ 0.8
TRAF4Q9BUZ4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF4Q9BUZ4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
TRAF4Q9BUZ4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRAF4Q9BUZ4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF4Q9BUZ4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF4Q9BUZ4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF4Q9BUZ4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.03■□□□□ 0.8
TRAF4Q9BUZ4 AC131281.2-201ENST00000520478 145 ntBASIC20.03■□□□□ 0.8
TRAF4Q9BUZ4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF4Q9BUZ4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRAF4Q9BUZ4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF4Q9BUZ4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF4Q9BUZ4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRAF4Q9BUZ4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF4Q9BUZ4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
TRAF4Q9BUZ4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TRAF4Q9BUZ4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TRAF4Q9BUZ4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAF4Q9BUZ4 MIR3621-201ENST00000580529 85 ntBASIC20.02■□□□□ 0.8
TRAF4Q9BUZ4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF4Q9BUZ4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.02■□□□□ 0.8
TRAF4Q9BUZ4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF4Q9BUZ4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF4Q9BUZ4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF4Q9BUZ4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAF4Q9BUZ4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.02■□□□□ 0.8
TRAF4Q9BUZ4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF4Q9BUZ4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.02■□□□□ 0.79
TRAF4Q9BUZ4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAF4Q9BUZ4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRAF4Q9BUZ4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.02■□□□□ 0.79
TRAF4Q9BUZ4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF4Q9BUZ4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms