Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF5Q99942 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
RNF5Q99942 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF5Q99942 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF5Q99942 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF5Q99942 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF5Q99942 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF5Q99942 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF5Q99942 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF5Q99942 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF5Q99942 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF5Q99942 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RNF5Q99942 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF5Q99942 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF5Q99942 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF5Q99942 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF5Q99942 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.06■□□□□ 0.48
RNF5Q99942 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RNF5Q99942 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF5Q99942 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RNF5Q99942 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF5Q99942 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF5Q99942 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF5Q99942 DUSP8P3-201ENST00000399571 1760 ntBASIC18.05■□□□□ 0.48
RNF5Q99942 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF5Q99942 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF5Q99942 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF5Q99942 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF5Q99942 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF5Q99942 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF5Q99942 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF5Q99942 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF5Q99942 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF5Q99942 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF5Q99942 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF5Q99942 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF5Q99942 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.04■□□□□ 0.48
RNF5Q99942 AL035685.1-201ENST00000636663 812 ntBASIC18.04■□□□□ 0.48
RNF5Q99942 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF5Q99942 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF5Q99942 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF5Q99942 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF5Q99942 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RNF5Q99942 FP325331.1-202ENST00000623531 1380 ntBASIC18.04■□□□□ 0.48
RNF5Q99942 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RNF5Q99942 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RNF5Q99942 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF5Q99942 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF5Q99942 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
RNF5Q99942 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RNF5Q99942 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF5Q99942 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF5Q99942 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF5Q99942 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF5Q99942 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF5Q99942 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF5Q99942 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF5Q99942 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF5Q99942 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF5Q99942 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.02■□□□□ 0.48
RNF5Q99942 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF5Q99942 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.02■□□□□ 0.47
RNF5Q99942 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.02■□□□□ 0.47
RNF5Q99942 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF5Q99942 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
RNF5Q99942 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF5Q99942 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF5Q99942 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF5Q99942 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF5Q99942 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF5Q99942 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF5Q99942 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF5Q99942 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF5Q99942 MIR6724-1-201ENST00000616420 92 ntBASIC18.01■□□□□ 0.47
RNF5Q99942 MIR6724-2-201ENST00000616483 92 ntBASIC18.01■□□□□ 0.47
RNF5Q99942 MIR6724-4-201ENST00000617390 92 ntBASIC18.01■□□□□ 0.47
RNF5Q99942 MIR6724-3-201ENST00000622482 92 ntBASIC18.01■□□□□ 0.47
RNF5Q99942 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RNF5Q99942 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF5Q99942 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF5Q99942 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RNF5Q99942 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF5Q99942 AC144652.1-201ENST00000609974 1624 ntBASIC18.01■□□□□ 0.47
RNF5Q99942 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF5Q99942 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF5Q99942 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF5Q99942 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF5Q99942 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF5Q99942 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18■□□□□ 0.47
RNF5Q99942 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF5Q99942 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
RNF5Q99942 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18■□□□□ 0.47
RNF5Q99942 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF5Q99942 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF5Q99942 TSPY9P-201ENST00000440215 945 ntBASIC18■□□□□ 0.47
RNF5Q99942 TSPY11P-201ENST00000442607 1045 ntBASIC18■□□□□ 0.47
RNF5Q99942 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18■□□□□ 0.47
RNF5Q99942 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF5Q99942 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18■□□□□ 0.47
RNF5Q99942 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms