Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PRICKLE1Q96MT3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.36■■□□□ 1.33
PRICKLE1Q96MT3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PRICKLE1Q96MT3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PRICKLE1Q96MT3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PRICKLE1Q96MT3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PRICKLE1Q96MT3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.35■■□□□ 1.33
PRICKLE1Q96MT3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PRICKLE1Q96MT3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PRICKLE1Q96MT3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PRICKLE1Q96MT3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.35■■□□□ 1.33
PRICKLE1Q96MT3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PRICKLE1Q96MT3 AC110285.6-201ENST00000617652 491 ntBASIC23.35■■□□□ 1.33
PRICKLE1Q96MT3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.35■■□□□ 1.33
PRICKLE1Q96MT3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.35■■□□□ 1.33
PRICKLE1Q96MT3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PRICKLE1Q96MT3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PRICKLE1Q96MT3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRICKLE1Q96MT3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRICKLE1Q96MT3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRICKLE1Q96MT3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.34■■□□□ 1.33
PRICKLE1Q96MT3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.34■■□□□ 1.33
PRICKLE1Q96MT3 AC096631.2-201ENST00000436136 790 ntBASIC23.34■■□□□ 1.33
PRICKLE1Q96MT3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PRICKLE1Q96MT3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PRICKLE1Q96MT3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.34■■□□□ 1.33
PRICKLE1Q96MT3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRICKLE1Q96MT3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PRICKLE1Q96MT3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
PRICKLE1Q96MT3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PRICKLE1Q96MT3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
PRICKLE1Q96MT3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PRICKLE1Q96MT3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PRICKLE1Q96MT3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
PRICKLE1Q96MT3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.33■■□□□ 1.33
PRICKLE1Q96MT3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.33■■□□□ 1.33
PRICKLE1Q96MT3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PRICKLE1Q96MT3 C17orf82-201ENST00000623772 1530 ntBASIC23.33■■□□□ 1.32
PRICKLE1Q96MT3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PRICKLE1Q96MT3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRICKLE1Q96MT3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PRICKLE1Q96MT3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PRICKLE1Q96MT3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.32■■□□□ 1.32
PRICKLE1Q96MT3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
PRICKLE1Q96MT3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PRICKLE1Q96MT3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PRICKLE1Q96MT3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRICKLE1Q96MT3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRICKLE1Q96MT3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
PRICKLE1Q96MT3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRICKLE1Q96MT3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.31■■□□□ 1.32
PRICKLE1Q96MT3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRICKLE1Q96MT3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRICKLE1Q96MT3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.31■■□□□ 1.32
PRICKLE1Q96MT3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.31■■□□□ 1.32
PRICKLE1Q96MT3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
PRICKLE1Q96MT3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRICKLE1Q96MT3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.31■■□□□ 1.32
PRICKLE1Q96MT3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRICKLE1Q96MT3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRICKLE1Q96MT3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRICKLE1Q96MT3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRICKLE1Q96MT3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
PRICKLE1Q96MT3 AL139246.5-201ENST00000606645 996 ntBASIC23.3■■□□□ 1.32
PRICKLE1Q96MT3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
PRICKLE1Q96MT3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRICKLE1Q96MT3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PRICKLE1Q96MT3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PRICKLE1Q96MT3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRICKLE1Q96MT3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRICKLE1Q96MT3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.29■■□□□ 1.32
PRICKLE1Q96MT3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PRICKLE1Q96MT3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
PRICKLE1Q96MT3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
PRICKLE1Q96MT3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PRICKLE1Q96MT3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.29■■□□□ 1.32
PRICKLE1Q96MT3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PRICKLE1Q96MT3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PRICKLE1Q96MT3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PRICKLE1Q96MT3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.28■■□□□ 1.32
PRICKLE1Q96MT3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
PRICKLE1Q96MT3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PRICKLE1Q96MT3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PRICKLE1Q96MT3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.28■■□□□ 1.32
PRICKLE1Q96MT3 ABCB10P4-201ENST00000566803 2184 ntBASIC23.28■■□□□ 1.32
PRICKLE1Q96MT3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PRICKLE1Q96MT3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PRICKLE1Q96MT3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PRICKLE1Q96MT3 AC133561.1-201ENST00000568600 2415 ntBASIC23.28■■□□□ 1.32
PRICKLE1Q96MT3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRICKLE1Q96MT3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRICKLE1Q96MT3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.27■■□□□ 1.32
PRICKLE1Q96MT3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.27■■□□□ 1.32
PRICKLE1Q96MT3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.27■■□□□ 1.32
PRICKLE1Q96MT3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.27■■□□□ 1.32
PRICKLE1Q96MT3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.27■■□□□ 1.32
PRICKLE1Q96MT3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRICKLE1Q96MT3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.27■■□□□ 1.31
PRICKLE1Q96MT3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
PRICKLE1Q96MT3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms