Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
USP9XQ93008 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
USP9XQ93008 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.03■□□□□ 0.8
USP9XQ93008 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
USP9XQ93008 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.03■□□□□ 0.8
USP9XQ93008 AP005435.1-201ENST00000529293 1178 ntBASIC20.02■□□□□ 0.8
USP9XQ93008 AC097639.1-201ENST00000565519 1891 ntBASIC20.02■□□□□ 0.8
USP9XQ93008 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP9XQ93008 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP9XQ93008 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP9XQ93008 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP9XQ93008 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.01■□□□□ 0.79
USP9XQ93008 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.01■□□□□ 0.79
USP9XQ93008 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.01■□□□□ 0.79
USP9XQ93008 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
USP9XQ93008 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.01■□□□□ 0.79
USP9XQ93008 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP9XQ93008 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.01■□□□□ 0.79
USP9XQ93008 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP9XQ93008 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP9XQ93008 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.01■□□□□ 0.79
USP9XQ93008 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP9XQ93008 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.01■□□□□ 0.79
USP9XQ93008 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP9XQ93008 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.01■□□□□ 0.79
USP9XQ93008 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.01■□□□□ 0.79
USP9XQ93008 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
USP9XQ93008 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP9XQ93008 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP9XQ93008 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP9XQ93008 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP9XQ93008 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP9XQ93008 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP9XQ93008 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20■□□□□ 0.79
USP9XQ93008 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
USP9XQ93008 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.99■□□□□ 0.79
USP9XQ93008 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.99■□□□□ 0.79
USP9XQ93008 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP9XQ93008 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP9XQ93008 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.99■□□□□ 0.79
USP9XQ93008 AC091060.1-201ENST00000623524 1766 ntBASIC19.99■□□□□ 0.79
USP9XQ93008 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USP9XQ93008 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP9XQ93008 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.98■□□□□ 0.79
USP9XQ93008 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.98■□□□□ 0.79
USP9XQ93008 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
USP9XQ93008 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.98■□□□□ 0.79
USP9XQ93008 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP9XQ93008 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.98■□□□□ 0.79
USP9XQ93008 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.98■□□□□ 0.79
USP9XQ93008 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.98■□□□□ 0.79
USP9XQ93008 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP9XQ93008 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.98■□□□□ 0.79
USP9XQ93008 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.98■□□□□ 0.79
USP9XQ93008 AC009086.3-201ENST00000623486 1008 ntBASIC19.98■□□□□ 0.79
USP9XQ93008 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.98■□□□□ 0.79
USP9XQ93008 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
USP9XQ93008 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.98■□□□□ 0.79
USP9XQ93008 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.97■□□□□ 0.79
USP9XQ93008 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP9XQ93008 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.97■□□□□ 0.79
USP9XQ93008 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
USP9XQ93008 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.97■□□□□ 0.79
USP9XQ93008 pRNA.6-201ENST00000610482 90 ntBASIC19.97■□□□□ 0.79
USP9XQ93008 pRNA.5-201ENST00000612139 90 ntBASIC19.97■□□□□ 0.79
USP9XQ93008 pRNA.11-201ENST00000618423 90 ntBASIC19.97■□□□□ 0.79
USP9XQ93008 pRNA.13-201ENST00000619112 90 ntBASIC19.97■□□□□ 0.79
USP9XQ93008 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
USP9XQ93008 AC004854.2-201ENST00000608450 1441 ntBASIC19.97■□□□□ 0.79
USP9XQ93008 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
USP9XQ93008 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP9XQ93008 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
USP9XQ93008 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.96■□□□□ 0.79
USP9XQ93008 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP9XQ93008 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
USP9XQ93008 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
USP9XQ93008 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
USP9XQ93008 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP9XQ93008 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP9XQ93008 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.95■□□□□ 0.78
USP9XQ93008 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
USP9XQ93008 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.95■□□□□ 0.78
USP9XQ93008 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.95■□□□□ 0.78
USP9XQ93008 ERN1-208ENST00000606895 2068 ntBASIC19.95■□□□□ 0.78
USP9XQ93008 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.95■□□□□ 0.78
USP9XQ93008 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP9XQ93008 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP9XQ93008 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.95■□□□□ 0.78
USP9XQ93008 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP9XQ93008 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP9XQ93008 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP9XQ93008 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP9XQ93008 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.94■□□□□ 0.78
USP9XQ93008 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.94■□□□□ 0.78
USP9XQ93008 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP9XQ93008 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP9XQ93008 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
USP9XQ93008 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.94■□□□□ 0.78
USP9XQ93008 GPX1P1-201ENST00000388829 606 ntBASIC19.93■□□□□ 0.78
USP9XQ93008 GUSBP6-202ENST00000438529 1198 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms