Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC29.9■■■□□ 2.38
RAPGEF4Q8WZA2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC29.9■■■□□ 2.38
RAPGEF4Q8WZA2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RAPGEF4Q8WZA2 AC034268.1-201ENST00000441047 882 ntBASIC29.9■■■□□ 2.38
RAPGEF4Q8WZA2 SLC47A1P1-202ENST00000449666 945 ntBASIC29.9■■■□□ 2.38
RAPGEF4Q8WZA2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RAPGEF4Q8WZA2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC29.9■■■□□ 2.38
RAPGEF4Q8WZA2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RAPGEF4Q8WZA2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC29.9■■■□□ 2.38
RAPGEF4Q8WZA2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC29.9■■■□□ 2.38
RAPGEF4Q8WZA2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC29.9■■■□□ 2.38
RAPGEF4Q8WZA2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC29.89■■■□□ 2.38
RAPGEF4Q8WZA2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC29.89■■■□□ 2.38
RAPGEF4Q8WZA2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
RAPGEF4Q8WZA2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RAPGEF4Q8WZA2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
RAPGEF4Q8WZA2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC29.88■■■□□ 2.37
RAPGEF4Q8WZA2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC29.88■■■□□ 2.37
RAPGEF4Q8WZA2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
RAPGEF4Q8WZA2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
RAPGEF4Q8WZA2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
RAPGEF4Q8WZA2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RAPGEF4Q8WZA2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
RAPGEF4Q8WZA2 YBX1P1-201ENST00000445822 960 ntBASIC29.87■■■□□ 2.37
RAPGEF4Q8WZA2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC29.87■■■□□ 2.37
RAPGEF4Q8WZA2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC29.87■■■□□ 2.37
RAPGEF4Q8WZA2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RAPGEF4Q8WZA2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RAPGEF4Q8WZA2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RAPGEF4Q8WZA2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC29.86■■■□□ 2.37
RAPGEF4Q8WZA2 NME4-202ENST00000382940 766 ntTSL 3 BASIC29.86■■■□□ 2.37
RAPGEF4Q8WZA2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC29.86■■■□□ 2.37
RAPGEF4Q8WZA2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC29.86■■■□□ 2.37
RAPGEF4Q8WZA2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC29.86■■■□□ 2.37
RAPGEF4Q8WZA2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC29.86■■■□□ 2.37
RAPGEF4Q8WZA2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC29.86■■■□□ 2.37
RAPGEF4Q8WZA2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC29.86■■■□□ 2.37
RAPGEF4Q8WZA2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RAPGEF4Q8WZA2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC29.85■■■□□ 2.37
RAPGEF4Q8WZA2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC29.85■■■□□ 2.37
RAPGEF4Q8WZA2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC29.85■■■□□ 2.37
RAPGEF4Q8WZA2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC29.85■■■□□ 2.37
RAPGEF4Q8WZA2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC29.85■■■□□ 2.37
RAPGEF4Q8WZA2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
RAPGEF4Q8WZA2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
RAPGEF4Q8WZA2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC29.85■■■□□ 2.37
RAPGEF4Q8WZA2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RAPGEF4Q8WZA2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC29.85■■■□□ 2.37
RAPGEF4Q8WZA2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RAPGEF4Q8WZA2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RAPGEF4Q8WZA2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC29.84■■■□□ 2.37
RAPGEF4Q8WZA2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RAPGEF4Q8WZA2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC29.84■■■□□ 2.37
RAPGEF4Q8WZA2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
RAPGEF4Q8WZA2 AL031602.1-201ENST00000633169 911 ntBASIC29.84■■■□□ 2.37
RAPGEF4Q8WZA2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC29.84■■■□□ 2.37
RAPGEF4Q8WZA2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RAPGEF4Q8WZA2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RAPGEF4Q8WZA2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC29.83■■■□□ 2.37
RAPGEF4Q8WZA2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
RAPGEF4Q8WZA2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
RAPGEF4Q8WZA2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC29.83■■■□□ 2.37
RAPGEF4Q8WZA2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC29.83■■■□□ 2.37
RAPGEF4Q8WZA2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC29.83■■■□□ 2.37
RAPGEF4Q8WZA2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
RAPGEF4Q8WZA2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
RAPGEF4Q8WZA2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
RAPGEF4Q8WZA2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC29.82■■■□□ 2.36
RAPGEF4Q8WZA2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC29.82■■■□□ 2.36
RAPGEF4Q8WZA2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
RAPGEF4Q8WZA2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC29.81■■■□□ 2.36
RAPGEF4Q8WZA2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC29.81■■■□□ 2.36
RAPGEF4Q8WZA2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC29.81■■■□□ 2.36
RAPGEF4Q8WZA2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC29.81■■■□□ 2.36
RAPGEF4Q8WZA2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
RAPGEF4Q8WZA2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC29.81■■■□□ 2.36
RAPGEF4Q8WZA2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
RAPGEF4Q8WZA2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC29.8■■■□□ 2.36
RAPGEF4Q8WZA2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC29.8■■■□□ 2.36
RAPGEF4Q8WZA2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
RAPGEF4Q8WZA2 IGHV3-19-201ENST00000521488 291 ntBASIC29.8■■■□□ 2.36
RAPGEF4Q8WZA2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC29.8■■■□□ 2.36
RAPGEF4Q8WZA2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
RAPGEF4Q8WZA2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
RAPGEF4Q8WZA2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
RAPGEF4Q8WZA2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
RAPGEF4Q8WZA2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
RAPGEF4Q8WZA2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
RAPGEF4Q8WZA2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC29.79■■■□□ 2.36
RAPGEF4Q8WZA2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC29.79■■■□□ 2.36
RAPGEF4Q8WZA2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
RAPGEF4Q8WZA2 AL358852.1-201ENST00000623174 1268 ntBASIC29.79■■■□□ 2.36
RAPGEF4Q8WZA2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
RAPGEF4Q8WZA2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
RAPGEF4Q8WZA2 KRT18P5-201ENST00000436075 1291 ntBASIC29.78■■■□□ 2.36
RAPGEF4Q8WZA2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC29.78■■■□□ 2.36
RAPGEF4Q8WZA2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
RAPGEF4Q8WZA2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC29.78■■■□□ 2.36
RAPGEF4Q8WZA2 AC022517.1-201ENST00000592429 346 ntBASIC29.78■■■□□ 2.36
RAPGEF4Q8WZA2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms