Protein–RNA interactions for Protein: Q8WTV0

SCARB1, Scavenger receptor class B member 1, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1Q8WTV0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCARB1Q8WTV0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCARB1Q8WTV0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.84■□□□□ 0.61
SCARB1Q8WTV0 AC025884.2-201ENST00000553429 711 ntBASIC18.84■□□□□ 0.61
SCARB1Q8WTV0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCARB1Q8WTV0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCARB1Q8WTV0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCARB1Q8WTV0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SCARB1Q8WTV0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCARB1Q8WTV0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.84■□□□□ 0.61
SCARB1Q8WTV0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCARB1Q8WTV0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SCARB1Q8WTV0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCARB1Q8WTV0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.83■□□□□ 0.61
SCARB1Q8WTV0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCARB1Q8WTV0 AC092296.2-201ENST00000589470 999 ntBASIC18.83■□□□□ 0.6
SCARB1Q8WTV0 AC022413.1-201ENST00000624602 984 ntBASIC18.83■□□□□ 0.6
SCARB1Q8WTV0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCARB1Q8WTV0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCARB1Q8WTV0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.82■□□□□ 0.6
SCARB1Q8WTV0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCARB1Q8WTV0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SCARB1Q8WTV0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCARB1Q8WTV0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCARB1Q8WTV0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.82■□□□□ 0.6
SCARB1Q8WTV0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.82■□□□□ 0.6
SCARB1Q8WTV0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCARB1Q8WTV0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.82■□□□□ 0.6
SCARB1Q8WTV0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCARB1Q8WTV0 SMPD5-203ENST00000639008 1464 ntBASIC18.82■□□□□ 0.6
SCARB1Q8WTV0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCARB1Q8WTV0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCARB1Q8WTV0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCARB1Q8WTV0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SCARB1Q8WTV0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCARB1Q8WTV0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 MIR3960-201ENST00000583311 91 ntBASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 AC242852.2-201ENST00000615738 1807 ntBASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
SCARB1Q8WTV0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SCARB1Q8WTV0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCARB1Q8WTV0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCARB1Q8WTV0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCARB1Q8WTV0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCARB1Q8WTV0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.8■□□□□ 0.6
SCARB1Q8WTV0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SCARB1Q8WTV0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCARB1Q8WTV0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCARB1Q8WTV0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCARB1Q8WTV0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.8■□□□□ 0.6
SCARB1Q8WTV0 MIR4449-201ENST00000578365 66 ntBASIC18.8■□□□□ 0.6
SCARB1Q8WTV0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCARB1Q8WTV0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCARB1Q8WTV0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
SCARB1Q8WTV0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCARB1Q8WTV0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.8■□□□□ 0.6
SCARB1Q8WTV0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SCARB1Q8WTV0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCARB1Q8WTV0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCARB1Q8WTV0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SCARB1Q8WTV0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCARB1Q8WTV0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCARB1Q8WTV0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SCARB1Q8WTV0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCARB1Q8WTV0 ECEL1P2-201ENST00000461596 1295 ntBASIC18.79■□□□□ 0.6
SCARB1Q8WTV0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCARB1Q8WTV0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SCARB1Q8WTV0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCARB1Q8WTV0 ANOS2P-203ENST00000472227 1816 ntBASIC18.79■□□□□ 0.6
SCARB1Q8WTV0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCARB1Q8WTV0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCARB1Q8WTV0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SCARB1Q8WTV0 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.78■□□□□ 0.6
SCARB1Q8WTV0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SCARB1Q8WTV0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.78■□□□□ 0.6
SCARB1Q8WTV0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCARB1Q8WTV0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.78■□□□□ 0.6
SCARB1Q8WTV0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCARB1Q8WTV0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
SCARB1Q8WTV0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SCARB1Q8WTV0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCARB1Q8WTV0 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.77■□□□□ 0.6
SCARB1Q8WTV0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms