Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 CLDN5-201ENST00000403084 2357 ntBASIC22.54■■□□□ 1.2
PPP4R1Q8TF05 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PPP4R1Q8TF05 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
PPP4R1Q8TF05 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PPP4R1Q8TF05 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PPP4R1Q8TF05 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PPP4R1Q8TF05 YBX1P4-201ENST00000392794 808 ntBASIC22.53■■□□□ 1.2
PPP4R1Q8TF05 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PPP4R1Q8TF05 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.53■■□□□ 1.2
PPP4R1Q8TF05 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PPP4R1Q8TF05 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PPP4R1Q8TF05 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PPP4R1Q8TF05 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PPP4R1Q8TF05 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PPP4R1Q8TF05 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.52■■□□□ 1.2
PPP4R1Q8TF05 KRT8P33-201ENST00000508125 1423 ntBASIC22.52■■□□□ 1.2
PPP4R1Q8TF05 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PPP4R1Q8TF05 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.52■■□□□ 1.2
PPP4R1Q8TF05 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PPP4R1Q8TF05 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
PPP4R1Q8TF05 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PPP4R1Q8TF05 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PPP4R1Q8TF05 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
PPP4R1Q8TF05 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PPP4R1Q8TF05 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.51■■□□□ 1.19
PPP4R1Q8TF05 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PPP4R1Q8TF05 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.51■■□□□ 1.19
PPP4R1Q8TF05 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PPP4R1Q8TF05 AC092068.2-201ENST00000590491 1708 ntBASIC22.51■■□□□ 1.19
PPP4R1Q8TF05 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPP4R1Q8TF05 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPP4R1Q8TF05 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPP4R1Q8TF05 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PPP4R1Q8TF05 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPP4R1Q8TF05 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PPP4R1Q8TF05 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PPP4R1Q8TF05 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
PPP4R1Q8TF05 DUSP8P3-201ENST00000399571 1760 ntBASIC22.5■■□□□ 1.19
PPP4R1Q8TF05 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.5■■□□□ 1.19
PPP4R1Q8TF05 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
PPP4R1Q8TF05 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PPP4R1Q8TF05 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PPP4R1Q8TF05 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PPP4R1Q8TF05 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PPP4R1Q8TF05 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.49■■□□□ 1.19
PPP4R1Q8TF05 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PPP4R1Q8TF05 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.49■■□□□ 1.19
PPP4R1Q8TF05 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PPP4R1Q8TF05 AL161729.1-201ENST00000604104 1402 ntBASIC22.48■■□□□ 1.19
PPP4R1Q8TF05 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R1Q8TF05 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R1Q8TF05 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R1Q8TF05 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.48■■□□□ 1.19
PPP4R1Q8TF05 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R1Q8TF05 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R1Q8TF05 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R1Q8TF05 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R1Q8TF05 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R1Q8TF05 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PPP4R1Q8TF05 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
PPP4R1Q8TF05 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R1Q8TF05 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PPP4R1Q8TF05 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R1Q8TF05 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R1Q8TF05 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R1Q8TF05 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R1Q8TF05 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.47■■□□□ 1.19
PPP4R1Q8TF05 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R1Q8TF05 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R1Q8TF05 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R1Q8TF05 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R1Q8TF05 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PPP4R1Q8TF05 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.47■■□□□ 1.19
PPP4R1Q8TF05 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PPP4R1Q8TF05 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PPP4R1Q8TF05 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PPP4R1Q8TF05 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PPP4R1Q8TF05 AC103834.1-201ENST00000520383 144 ntBASIC22.46■■□□□ 1.19
PPP4R1Q8TF05 MIR4508-201ENST00000584178 70 ntBASIC22.46■■□□□ 1.19
PPP4R1Q8TF05 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PPP4R1Q8TF05 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
PPP4R1Q8TF05 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PPP4R1Q8TF05 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.19
PPP4R1Q8TF05 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.45■■□□□ 1.19
PPP4R1Q8TF05 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PPP4R1Q8TF05 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
PPP4R1Q8TF05 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PPP4R1Q8TF05 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PPP4R1Q8TF05 LONRF2P2-201ENST00000439212 571 ntBASIC22.45■■□□□ 1.18
PPP4R1Q8TF05 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.45■■□□□ 1.18
PPP4R1Q8TF05 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.45■■□□□ 1.18
PPP4R1Q8TF05 AC009299.2-201ENST00000482477 511 ntBASIC22.45■■□□□ 1.18
PPP4R1Q8TF05 PVT1_1.1-201ENST00000615125 194 ntBASIC22.45■■□□□ 1.18
PPP4R1Q8TF05 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.45■■□□□ 1.18
PPP4R1Q8TF05 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PPP4R1Q8TF05 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PPP4R1Q8TF05 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PPP4R1Q8TF05 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.44■■□□□ 1.18
PPP4R1Q8TF05 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PPP4R1Q8TF05 EP400NL-214ENST00000641289 2402 ntBASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms