Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RDH11Q8TC12 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
RDH11Q8TC12 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
RDH11Q8TC12 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RDH11Q8TC12 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RDH11Q8TC12 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RDH11Q8TC12 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RDH11Q8TC12 KRT18P60-201ENST00000312876 1297 ntBASIC22.22■■□□□ 1.15
RDH11Q8TC12 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RDH11Q8TC12 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
RDH11Q8TC12 AC127496.7-201ENST00000625110 1798 ntBASIC22.22■■□□□ 1.15
RDH11Q8TC12 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.22■■□□□ 1.15
RDH11Q8TC12 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RDH11Q8TC12 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
RDH11Q8TC12 ESRRAP2-201ENST00000418437 1549 ntBASIC22.21■■□□□ 1.15
RDH11Q8TC12 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.21■■□□□ 1.15
RDH11Q8TC12 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RDH11Q8TC12 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
RDH11Q8TC12 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RDH11Q8TC12 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RDH11Q8TC12 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RDH11Q8TC12 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RDH11Q8TC12 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RDH11Q8TC12 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RDH11Q8TC12 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RDH11Q8TC12 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.2■■□□□ 1.14
RDH11Q8TC12 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RDH11Q8TC12 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
RDH11Q8TC12 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.2■■□□□ 1.14
RDH11Q8TC12 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RDH11Q8TC12 CLDN5-201ENST00000403084 2357 ntBASIC22.2■■□□□ 1.14
RDH11Q8TC12 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
RDH11Q8TC12 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RDH11Q8TC12 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
RDH11Q8TC12 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RDH11Q8TC12 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.19■■□□□ 1.14
RDH11Q8TC12 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RDH11Q8TC12 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
RDH11Q8TC12 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.19■■□□□ 1.14
RDH11Q8TC12 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RDH11Q8TC12 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RDH11Q8TC12 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RDH11Q8TC12 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RDH11Q8TC12 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.19■■□□□ 1.14
RDH11Q8TC12 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
RDH11Q8TC12 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RDH11Q8TC12 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.18■■□□□ 1.14
RDH11Q8TC12 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RDH11Q8TC12 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RDH11Q8TC12 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RDH11Q8TC12 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RDH11Q8TC12 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RDH11Q8TC12 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RDH11Q8TC12 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RDH11Q8TC12 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RDH11Q8TC12 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.17■■□□□ 1.14
RDH11Q8TC12 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RDH11Q8TC12 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.17■■□□□ 1.14
RDH11Q8TC12 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.17■■□□□ 1.14
RDH11Q8TC12 AC139795.1-202ENST00000500444 432 ntBASIC22.17■■□□□ 1.14
RDH11Q8TC12 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.17■■□□□ 1.14
RDH11Q8TC12 AC079630.1-202ENST00000618127 1840 ntBASIC22.17■■□□□ 1.14
RDH11Q8TC12 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
RDH11Q8TC12 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RDH11Q8TC12 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RDH11Q8TC12 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RDH11Q8TC12 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RDH11Q8TC12 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RDH11Q8TC12 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RDH11Q8TC12 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RDH11Q8TC12 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RDH11Q8TC12 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.16■■□□□ 1.14
RDH11Q8TC12 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.16■■□□□ 1.14
RDH11Q8TC12 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RDH11Q8TC12 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RDH11Q8TC12 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.16■■□□□ 1.14
RDH11Q8TC12 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.16■■□□□ 1.14
RDH11Q8TC12 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.16■■□□□ 1.14
RDH11Q8TC12 LINC00565-201ENST00000562710 2331 ntBASIC22.15■■□□□ 1.14
RDH11Q8TC12 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.15■■□□□ 1.14
RDH11Q8TC12 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RDH11Q8TC12 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RDH11Q8TC12 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RDH11Q8TC12 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.15■■□□□ 1.14
RDH11Q8TC12 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RDH11Q8TC12 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RDH11Q8TC12 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RDH11Q8TC12 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.15■■□□□ 1.14
RDH11Q8TC12 AC120024.1-201ENST00000562672 995 ntBASIC22.15■■□□□ 1.14
RDH11Q8TC12 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RDH11Q8TC12 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RDH11Q8TC12 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.15■■□□□ 1.14
RDH11Q8TC12 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RDH11Q8TC12 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RDH11Q8TC12 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RDH11Q8TC12 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.15■■□□□ 1.14
RDH11Q8TC12 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.15■■□□□ 1.14
RDH11Q8TC12 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.15■■□□□ 1.14
RDH11Q8TC12 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RDH11Q8TC12 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms