Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SHKBP1Q8TBC3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHKBP1Q8TBC3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHKBP1Q8TBC3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.76■■□□□ 1.39
SHKBP1Q8TBC3 CA15P2-201ENST00000611168 834 ntBASIC23.76■■□□□ 1.39
SHKBP1Q8TBC3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SHKBP1Q8TBC3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHKBP1Q8TBC3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHKBP1Q8TBC3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHKBP1Q8TBC3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SHKBP1Q8TBC3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SHKBP1Q8TBC3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.75■■□□□ 1.39
SHKBP1Q8TBC3 AC241377.3-202ENST00000626088 1088 ntBASIC23.75■■□□□ 1.39
SHKBP1Q8TBC3 AC241585.3-202ENST00000628937 1088 ntBASIC23.75■■□□□ 1.39
SHKBP1Q8TBC3 AC245100.8-202ENST00000629247 1058 ntBASIC23.75■■□□□ 1.39
SHKBP1Q8TBC3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHKBP1Q8TBC3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
SHKBP1Q8TBC3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHKBP1Q8TBC3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHKBP1Q8TBC3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SHKBP1Q8TBC3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHKBP1Q8TBC3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHKBP1Q8TBC3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHKBP1Q8TBC3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.74■■□□□ 1.39
SHKBP1Q8TBC3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.74■■□□□ 1.39
SHKBP1Q8TBC3 RASA4CP-201ENST00000424092 1398 ntBASIC23.74■■□□□ 1.39
SHKBP1Q8TBC3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHKBP1Q8TBC3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHKBP1Q8TBC3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHKBP1Q8TBC3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SHKBP1Q8TBC3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.73■■□□□ 1.39
SHKBP1Q8TBC3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHKBP1Q8TBC3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.73■■□□□ 1.39
SHKBP1Q8TBC3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SHKBP1Q8TBC3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SHKBP1Q8TBC3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.73■■□□□ 1.39
SHKBP1Q8TBC3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHKBP1Q8TBC3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SHKBP1Q8TBC3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SHKBP1Q8TBC3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHKBP1Q8TBC3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.73■■□□□ 1.39
SHKBP1Q8TBC3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHKBP1Q8TBC3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.73■■□□□ 1.39
SHKBP1Q8TBC3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHKBP1Q8TBC3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHKBP1Q8TBC3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHKBP1Q8TBC3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHKBP1Q8TBC3 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.72■■□□□ 1.39
SHKBP1Q8TBC3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.72■■□□□ 1.39
SHKBP1Q8TBC3 AC027682.1-201ENST00000562846 899 ntBASIC23.72■■□□□ 1.39
SHKBP1Q8TBC3 AC008764.7-201ENST00000593779 1081 ntBASIC23.72■■□□□ 1.39
SHKBP1Q8TBC3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.72■■□□□ 1.39
SHKBP1Q8TBC3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.72■■□□□ 1.39
SHKBP1Q8TBC3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
SHKBP1Q8TBC3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.72■■□□□ 1.39
SHKBP1Q8TBC3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHKBP1Q8TBC3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SHKBP1Q8TBC3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHKBP1Q8TBC3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHKBP1Q8TBC3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHKBP1Q8TBC3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHKBP1Q8TBC3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHKBP1Q8TBC3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
SHKBP1Q8TBC3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHKBP1Q8TBC3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHKBP1Q8TBC3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.71■■□□□ 1.39
SHKBP1Q8TBC3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.71■■□□□ 1.39
SHKBP1Q8TBC3 AC009086.3-201ENST00000623486 1008 ntBASIC23.71■■□□□ 1.39
SHKBP1Q8TBC3 AC136469.2-201ENST00000623944 1028 ntBASIC23.71■■□□□ 1.39
SHKBP1Q8TBC3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.7■■□□□ 1.39
SHKBP1Q8TBC3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHKBP1Q8TBC3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.7■■□□□ 1.38
SHKBP1Q8TBC3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHKBP1Q8TBC3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHKBP1Q8TBC3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.7■■□□□ 1.38
SHKBP1Q8TBC3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHKBP1Q8TBC3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHKBP1Q8TBC3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
SHKBP1Q8TBC3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHKBP1Q8TBC3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SHKBP1Q8TBC3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
SHKBP1Q8TBC3 MIR3181-201ENST00000578512 73 ntBASIC23.69■■□□□ 1.38
SHKBP1Q8TBC3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHKBP1Q8TBC3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SHKBP1Q8TBC3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
SHKBP1Q8TBC3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.69■■□□□ 1.38
SHKBP1Q8TBC3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SHKBP1Q8TBC3 ALDH1A3-203ENST00000557963 1670 ntBASIC23.68■■□□□ 1.38
SHKBP1Q8TBC3 AC099791.1-201ENST00000416440 715 ntBASIC23.68■■□□□ 1.38
SHKBP1Q8TBC3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SHKBP1Q8TBC3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms