Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BBS1Q8NFJ9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.31■□□□□ 0.84
BBS1Q8NFJ9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
BBS1Q8NFJ9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
BBS1Q8NFJ9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
BBS1Q8NFJ9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BBS1Q8NFJ9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BBS1Q8NFJ9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
BBS1Q8NFJ9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BBS1Q8NFJ9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
BBS1Q8NFJ9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.3■□□□□ 0.84
BBS1Q8NFJ9 AC129492.7-201ENST00000622992 756 ntBASIC20.3■□□□□ 0.84
BBS1Q8NFJ9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
BBS1Q8NFJ9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BBS1Q8NFJ9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BBS1Q8NFJ9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BBS1Q8NFJ9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
BBS1Q8NFJ9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
BBS1Q8NFJ9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BBS1Q8NFJ9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BBS1Q8NFJ9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
BBS1Q8NFJ9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.29■□□□□ 0.84
BBS1Q8NFJ9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
BBS1Q8NFJ9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
BBS1Q8NFJ9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BBS1Q8NFJ9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BBS1Q8NFJ9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BBS1Q8NFJ9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BBS1Q8NFJ9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BBS1Q8NFJ9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BBS1Q8NFJ9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.28■□□□□ 0.84
BBS1Q8NFJ9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.28■□□□□ 0.84
BBS1Q8NFJ9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BBS1Q8NFJ9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
BBS1Q8NFJ9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
BBS1Q8NFJ9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BBS1Q8NFJ9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
BBS1Q8NFJ9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BBS1Q8NFJ9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
BBS1Q8NFJ9 AC011551.1-201ENST00000614101 683 ntBASIC20.28■□□□□ 0.84
BBS1Q8NFJ9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BBS1Q8NFJ9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BBS1Q8NFJ9 LINC00526-201ENST00000581067 1875 ntBASIC20.28■□□□□ 0.84
BBS1Q8NFJ9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BBS1Q8NFJ9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BBS1Q8NFJ9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
BBS1Q8NFJ9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BBS1Q8NFJ9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.27■□□□□ 0.84
BBS1Q8NFJ9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BBS1Q8NFJ9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BBS1Q8NFJ9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BBS1Q8NFJ9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.27■□□□□ 0.84
BBS1Q8NFJ9 RARRES2P2-201ENST00000394842 485 ntBASIC20.27■□□□□ 0.84
BBS1Q8NFJ9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.27■□□□□ 0.84
BBS1Q8NFJ9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BBS1Q8NFJ9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
BBS1Q8NFJ9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BBS1Q8NFJ9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BBS1Q8NFJ9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BBS1Q8NFJ9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BBS1Q8NFJ9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BBS1Q8NFJ9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BBS1Q8NFJ9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BBS1Q8NFJ9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.26■□□□□ 0.83
BBS1Q8NFJ9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
BBS1Q8NFJ9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BBS1Q8NFJ9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BBS1Q8NFJ9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BBS1Q8NFJ9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BBS1Q8NFJ9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BBS1Q8NFJ9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BBS1Q8NFJ9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.25■□□□□ 0.83
BBS1Q8NFJ9 KRT18P60-201ENST00000312876 1297 ntBASIC20.25■□□□□ 0.83
BBS1Q8NFJ9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BBS1Q8NFJ9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BBS1Q8NFJ9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BBS1Q8NFJ9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BBS1Q8NFJ9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
BBS1Q8NFJ9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BBS1Q8NFJ9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.24■□□□□ 0.83
BBS1Q8NFJ9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
BBS1Q8NFJ9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
BBS1Q8NFJ9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.24■□□□□ 0.83
BBS1Q8NFJ9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BBS1Q8NFJ9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
BBS1Q8NFJ9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BBS1Q8NFJ9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.24■□□□□ 0.83
BBS1Q8NFJ9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BBS1Q8NFJ9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BBS1Q8NFJ9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.23■□□□□ 0.83
BBS1Q8NFJ9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.23■□□□□ 0.83
BBS1Q8NFJ9 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.23■□□□□ 0.83
BBS1Q8NFJ9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
BBS1Q8NFJ9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.23■□□□□ 0.83
BBS1Q8NFJ9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BBS1Q8NFJ9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BBS1Q8NFJ9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BBS1Q8NFJ9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BBS1Q8NFJ9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BBS1Q8NFJ9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms