Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RTL9Q8NET4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC28.06■■■□□ 2.08
RTL9Q8NET4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
RTL9Q8NET4 AC097381.1-201ENST00000429019 1296 ntBASIC28.06■■■□□ 2.08
RTL9Q8NET4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC28.06■■■□□ 2.08
RTL9Q8NET4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC28.06■■■□□ 2.08
RTL9Q8NET4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC28.06■■■□□ 2.08
RTL9Q8NET4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RTL9Q8NET4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RTL9Q8NET4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
RTL9Q8NET4 AC141586.4-201ENST00000624558 1573 ntBASIC28.05■■■□□ 2.08
RTL9Q8NET4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC28.05■■■□□ 2.08
RTL9Q8NET4 AC087623.3-201ENST00000607047 1098 ntBASIC28.05■■■□□ 2.08
RTL9Q8NET4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
RTL9Q8NET4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
RTL9Q8NET4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
RTL9Q8NET4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
RTL9Q8NET4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC28.05■■■□□ 2.08
RTL9Q8NET4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RTL9Q8NET4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
RTL9Q8NET4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
RTL9Q8NET4 EED-207ENST00000528180 1745 ntTSL 5 BASIC28.04■■■□□ 2.08
RTL9Q8NET4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC28.04■■■□□ 2.08
RTL9Q8NET4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RTL9Q8NET4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
RTL9Q8NET4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC28.03■■■□□ 2.08
RTL9Q8NET4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
RTL9Q8NET4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
RTL9Q8NET4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
RTL9Q8NET4 AC099791.1-201ENST00000416440 715 ntBASIC28.03■■■□□ 2.08
RTL9Q8NET4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
RTL9Q8NET4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
RTL9Q8NET4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC28.03■■■□□ 2.08
RTL9Q8NET4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
RTL9Q8NET4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
RTL9Q8NET4 BX842568.3-201ENST00000418104 571 ntBASIC28.02■■■□□ 2.08
RTL9Q8NET4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
RTL9Q8NET4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
RTL9Q8NET4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
RTL9Q8NET4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
RTL9Q8NET4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
RTL9Q8NET4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC28.02■■■□□ 2.08
RTL9Q8NET4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC28.02■■■□□ 2.08
RTL9Q8NET4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
RTL9Q8NET4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC28.01■■■□□ 2.07
RTL9Q8NET4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC28.01■■■□□ 2.07
RTL9Q8NET4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC28.01■■■□□ 2.07
RTL9Q8NET4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
RTL9Q8NET4 AC135731.1-201ENST00000569415 2548 ntBASIC28■■■□□ 2.07
RTL9Q8NET4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28■■■□□ 2.07
RTL9Q8NET4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC28■■■□□ 2.07
RTL9Q8NET4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC28■■■□□ 2.07
RTL9Q8NET4 AC008764.7-201ENST00000593779 1081 ntBASIC28■■■□□ 2.07
RTL9Q8NET4 MPST-208ENST00000628507 698 ntTSL 5 BASIC28■■■□□ 2.07
RTL9Q8NET4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
RTL9Q8NET4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
RTL9Q8NET4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28■■■□□ 2.07
RTL9Q8NET4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC27.99■■■□□ 2.07
RTL9Q8NET4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
RTL9Q8NET4 AC233992.3-201ENST00000607491 485 ntBASIC27.99■■■□□ 2.07
RTL9Q8NET4 pRNA.6-201ENST00000610482 90 ntBASIC27.99■■■□□ 2.07
RTL9Q8NET4 pRNA.5-201ENST00000612139 90 ntBASIC27.99■■■□□ 2.07
RTL9Q8NET4 pRNA.11-201ENST00000618423 90 ntBASIC27.99■■■□□ 2.07
RTL9Q8NET4 pRNA.13-201ENST00000619112 90 ntBASIC27.99■■■□□ 2.07
RTL9Q8NET4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
RTL9Q8NET4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
RTL9Q8NET4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC27.99■■■□□ 2.07
RTL9Q8NET4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
RTL9Q8NET4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
RTL9Q8NET4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
RTL9Q8NET4 AL162430.1-201ENST00000480705 870 ntBASIC27.99■■■□□ 2.07
RTL9Q8NET4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC27.99■■■□□ 2.07
RTL9Q8NET4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC27.99■■■□□ 2.07
RTL9Q8NET4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
RTL9Q8NET4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RTL9Q8NET4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RTL9Q8NET4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
RTL9Q8NET4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.98■■■□□ 2.07
RTL9Q8NET4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RTL9Q8NET4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC27.98■■■□□ 2.07
RTL9Q8NET4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
RTL9Q8NET4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
RTL9Q8NET4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC27.97■■■□□ 2.07
RTL9Q8NET4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC27.97■■■□□ 2.07
RTL9Q8NET4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
RTL9Q8NET4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
RTL9Q8NET4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
RTL9Q8NET4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
RTL9Q8NET4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
RTL9Q8NET4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC27.95■■■□□ 2.07
RTL9Q8NET4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
RTL9Q8NET4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC27.95■■■□□ 2.06
RTL9Q8NET4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
RTL9Q8NET4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
RTL9Q8NET4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RTL9Q8NET4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RTL9Q8NET4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC27.94■■■□□ 2.06
RTL9Q8NET4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
RTL9Q8NET4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RTL9Q8NET4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms