Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRAM1L1Q8N609 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
TRAM1L1Q8N609 C17orf82-201ENST00000623772 1530 ntBASIC22.4■■□□□ 1.18
TRAM1L1Q8N609 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRAM1L1Q8N609 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRAM1L1Q8N609 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
TRAM1L1Q8N609 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TRAM1L1Q8N609 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TRAM1L1Q8N609 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRAM1L1Q8N609 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
TRAM1L1Q8N609 AL136116.3-201ENST00000402907 1138 ntBASIC22.39■■□□□ 1.17
TRAM1L1Q8N609 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TRAM1L1Q8N609 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.39■■□□□ 1.17
TRAM1L1Q8N609 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRAM1L1Q8N609 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
TRAM1L1Q8N609 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
TRAM1L1Q8N609 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TRAM1L1Q8N609 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRAM1L1Q8N609 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TRAM1L1Q8N609 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRAM1L1Q8N609 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.38■■□□□ 1.17
TRAM1L1Q8N609 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TRAM1L1Q8N609 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.37■■□□□ 1.17
TRAM1L1Q8N609 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TRAM1L1Q8N609 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRAM1L1Q8N609 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRAM1L1Q8N609 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.37■■□□□ 1.17
TRAM1L1Q8N609 SRD5A1P1-201ENST00000442297 786 ntBASIC22.37■■□□□ 1.17
TRAM1L1Q8N609 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRAM1L1Q8N609 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.37■■□□□ 1.17
TRAM1L1Q8N609 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRAM1L1Q8N609 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.37■■□□□ 1.17
TRAM1L1Q8N609 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TRAM1L1Q8N609 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRAM1L1Q8N609 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TRAM1L1Q8N609 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.36■■□□□ 1.17
TRAM1L1Q8N609 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.36■■□□□ 1.17
TRAM1L1Q8N609 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
TRAM1L1Q8N609 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRAM1L1Q8N609 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
TRAM1L1Q8N609 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRAM1L1Q8N609 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TRAM1L1Q8N609 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TRAM1L1Q8N609 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRAM1L1Q8N609 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRAM1L1Q8N609 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
TRAM1L1Q8N609 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
TRAM1L1Q8N609 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRAM1L1Q8N609 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRAM1L1Q8N609 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
TRAM1L1Q8N609 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TRAM1L1Q8N609 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.35■■□□□ 1.17
TRAM1L1Q8N609 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.35■■□□□ 1.17
TRAM1L1Q8N609 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.35■■□□□ 1.17
TRAM1L1Q8N609 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRAM1L1Q8N609 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.35■■□□□ 1.17
TRAM1L1Q8N609 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRAM1L1Q8N609 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
TRAM1L1Q8N609 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRAM1L1Q8N609 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRAM1L1Q8N609 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRAM1L1Q8N609 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRAM1L1Q8N609 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRAM1L1Q8N609 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.33■■□□□ 1.17
TRAM1L1Q8N609 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TRAM1L1Q8N609 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TRAM1L1Q8N609 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TRAM1L1Q8N609 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
TRAM1L1Q8N609 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRAM1L1Q8N609 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRAM1L1Q8N609 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
TRAM1L1Q8N609 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRAM1L1Q8N609 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
TRAM1L1Q8N609 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TRAM1L1Q8N609 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
TRAM1L1Q8N609 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
TRAM1L1Q8N609 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRAM1L1Q8N609 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRAM1L1Q8N609 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TRAM1L1Q8N609 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
TRAM1L1Q8N609 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.31■■□□□ 1.16
TRAM1L1Q8N609 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.31■■□□□ 1.16
TRAM1L1Q8N609 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TRAM1L1Q8N609 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRAM1L1Q8N609 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.31■■□□□ 1.16
TRAM1L1Q8N609 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.31■■□□□ 1.16
TRAM1L1Q8N609 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRAM1L1Q8N609 AC241377.3-202ENST00000626088 1088 ntBASIC22.31■■□□□ 1.16
TRAM1L1Q8N609 AC241585.3-202ENST00000628937 1088 ntBASIC22.31■■□□□ 1.16
TRAM1L1Q8N609 AC245100.8-202ENST00000629247 1058 ntBASIC22.31■■□□□ 1.16
TRAM1L1Q8N609 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.31■■□□□ 1.16
TRAM1L1Q8N609 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRAM1L1Q8N609 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRAM1L1Q8N609 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRAM1L1Q8N609 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRAM1L1Q8N609 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.3■■□□□ 1.16
TRAM1L1Q8N609 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRAM1L1Q8N609 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.3■■□□□ 1.16
TRAM1L1Q8N609 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRAM1L1Q8N609 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms