Protein–RNA interactions for Protein: Q8IZA3

H1FOO, Histone H1oo, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1FOOQ8IZA3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H1FOOQ8IZA3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
H1FOOQ8IZA3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
H1FOOQ8IZA3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
H1FOOQ8IZA3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H1FOOQ8IZA3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
H1FOOQ8IZA3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.72■□□□□ 0.59
H1FOOQ8IZA3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
H1FOOQ8IZA3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.72■□□□□ 0.59
H1FOOQ8IZA3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
H1FOOQ8IZA3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.72■□□□□ 0.59
H1FOOQ8IZA3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
H1FOOQ8IZA3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H1FOOQ8IZA3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H1FOOQ8IZA3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
H1FOOQ8IZA3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H1FOOQ8IZA3 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.71■□□□□ 0.59
H1FOOQ8IZA3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H1FOOQ8IZA3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
H1FOOQ8IZA3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H1FOOQ8IZA3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.71■□□□□ 0.59
H1FOOQ8IZA3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.71■□□□□ 0.59
H1FOOQ8IZA3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H1FOOQ8IZA3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H1FOOQ8IZA3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H1FOOQ8IZA3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.71■□□□□ 0.59
H1FOOQ8IZA3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
H1FOOQ8IZA3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
H1FOOQ8IZA3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
H1FOOQ8IZA3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.7■□□□□ 0.58
H1FOOQ8IZA3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
H1FOOQ8IZA3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
H1FOOQ8IZA3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.7■□□□□ 0.58
H1FOOQ8IZA3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
H1FOOQ8IZA3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
H1FOOQ8IZA3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
H1FOOQ8IZA3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H1FOOQ8IZA3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
H1FOOQ8IZA3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H1FOOQ8IZA3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H1FOOQ8IZA3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H1FOOQ8IZA3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
H1FOOQ8IZA3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.69■□□□□ 0.58
H1FOOQ8IZA3 DUX4L18-201ENST00000553347 1267 ntBASIC18.69■□□□□ 0.58
H1FOOQ8IZA3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.69■□□□□ 0.58
H1FOOQ8IZA3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
H1FOOQ8IZA3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H1FOOQ8IZA3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
H1FOOQ8IZA3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H1FOOQ8IZA3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
H1FOOQ8IZA3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H1FOOQ8IZA3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H1FOOQ8IZA3 AC120024.1-201ENST00000562672 995 ntBASIC18.68■□□□□ 0.58
H1FOOQ8IZA3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.68■□□□□ 0.58
H1FOOQ8IZA3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
H1FOOQ8IZA3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.68■□□□□ 0.58
H1FOOQ8IZA3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
H1FOOQ8IZA3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H1FOOQ8IZA3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
H1FOOQ8IZA3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H1FOOQ8IZA3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
H1FOOQ8IZA3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H1FOOQ8IZA3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H1FOOQ8IZA3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
H1FOOQ8IZA3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H1FOOQ8IZA3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.67■□□□□ 0.58
H1FOOQ8IZA3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H1FOOQ8IZA3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.67■□□□□ 0.58
H1FOOQ8IZA3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.67■□□□□ 0.58
H1FOOQ8IZA3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
H1FOOQ8IZA3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
H1FOOQ8IZA3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
H1FOOQ8IZA3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H1FOOQ8IZA3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.66■□□□□ 0.58
H1FOOQ8IZA3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H1FOOQ8IZA3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H1FOOQ8IZA3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.66■□□□□ 0.58
H1FOOQ8IZA3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
H1FOOQ8IZA3 ABHD17AP5-201ENST00000580133 923 ntBASIC18.66■□□□□ 0.58
H1FOOQ8IZA3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.66■□□□□ 0.58
H1FOOQ8IZA3 NTF6A-201ENST00000591175 560 ntBASIC18.66■□□□□ 0.58
H1FOOQ8IZA3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
H1FOOQ8IZA3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
H1FOOQ8IZA3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H1FOOQ8IZA3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
H1FOOQ8IZA3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
H1FOOQ8IZA3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H1FOOQ8IZA3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H1FOOQ8IZA3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H1FOOQ8IZA3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H1FOOQ8IZA3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H1FOOQ8IZA3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
H1FOOQ8IZA3 AF131216.4-201ENST00000638924 1588 ntBASIC18.65■□□□□ 0.58
H1FOOQ8IZA3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
H1FOOQ8IZA3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H1FOOQ8IZA3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.65■□□□□ 0.58
H1FOOQ8IZA3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H1FOOQ8IZA3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.65■□□□□ 0.58
H1FOOQ8IZA3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.65■□□□□ 0.58
H1FOOQ8IZA3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms