Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHPFQ8IZ52 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHPFQ8IZ52 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHPFQ8IZ52 AC006455.2-201ENST00000429931 906 ntBASIC23.03■■□□□ 1.28
CHPFQ8IZ52 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.03■■□□□ 1.28
CHPFQ8IZ52 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.03■■□□□ 1.28
CHPFQ8IZ52 CA15P2-201ENST00000611168 834 ntBASIC23.03■■□□□ 1.28
CHPFQ8IZ52 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.03■■□□□ 1.28
CHPFQ8IZ52 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
CHPFQ8IZ52 AC022211.4-201ENST00000625094 2161 ntBASIC23.03■■□□□ 1.28
CHPFQ8IZ52 ALDH1A3-203ENST00000557963 1670 ntBASIC23.03■■□□□ 1.28
CHPFQ8IZ52 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHPFQ8IZ52 AC026271.2-201ENST00000428091 497 ntBASIC23.02■■□□□ 1.28
CHPFQ8IZ52 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHPFQ8IZ52 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHPFQ8IZ52 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHPFQ8IZ52 AC093323.1-202ENST00000635031 2045 ntBASIC23.01■■□□□ 1.27
CHPFQ8IZ52 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.01■■□□□ 1.27
CHPFQ8IZ52 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CHPFQ8IZ52 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHPFQ8IZ52 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHPFQ8IZ52 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.01■■□□□ 1.27
CHPFQ8IZ52 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.01■■□□□ 1.27
CHPFQ8IZ52 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHPFQ8IZ52 AC136469.2-201ENST00000623944 1028 ntBASIC23.01■■□□□ 1.27
CHPFQ8IZ52 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHPFQ8IZ52 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CHPFQ8IZ52 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.01■■□□□ 1.27
CHPFQ8IZ52 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CHPFQ8IZ52 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.01■■□□□ 1.27
CHPFQ8IZ52 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23■■□□□ 1.27
CHPFQ8IZ52 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CHPFQ8IZ52 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CHPFQ8IZ52 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CHPFQ8IZ52 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CHPFQ8IZ52 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CHPFQ8IZ52 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23■■□□□ 1.27
CHPFQ8IZ52 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHPFQ8IZ52 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CHPFQ8IZ52 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CHPFQ8IZ52 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHPFQ8IZ52 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.99■■□□□ 1.27
CHPFQ8IZ52 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.99■■□□□ 1.27
CHPFQ8IZ52 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CHPFQ8IZ52 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CHPFQ8IZ52 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.98■■□□□ 1.27
CHPFQ8IZ52 AC099791.1-201ENST00000416440 715 ntBASIC22.98■■□□□ 1.27
CHPFQ8IZ52 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.98■■□□□ 1.27
CHPFQ8IZ52 MIR3181-201ENST00000578512 73 ntBASIC22.98■■□□□ 1.27
CHPFQ8IZ52 MIR5787-201ENST00000611784 55 ntBASIC22.98■■□□□ 1.27
CHPFQ8IZ52 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CHPFQ8IZ52 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CHPFQ8IZ52 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CHPFQ8IZ52 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CHPFQ8IZ52 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CHPFQ8IZ52 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.97■■□□□ 1.27
CHPFQ8IZ52 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CHPFQ8IZ52 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.97■■□□□ 1.27
CHPFQ8IZ52 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.97■■□□□ 1.27
CHPFQ8IZ52 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CHPFQ8IZ52 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CHPFQ8IZ52 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CHPFQ8IZ52 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.97■■□□□ 1.27
CHPFQ8IZ52 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
CHPFQ8IZ52 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.97■■□□□ 1.27
CHPFQ8IZ52 AP003733.4-201ENST00000623785 1697 ntBASIC22.97■■□□□ 1.27
CHPFQ8IZ52 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CHPFQ8IZ52 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHPFQ8IZ52 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CHPFQ8IZ52 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHPFQ8IZ52 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CHPFQ8IZ52 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.96■■□□□ 1.27
CHPFQ8IZ52 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.96■■□□□ 1.27
CHPFQ8IZ52 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.96■■□□□ 1.27
CHPFQ8IZ52 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHPFQ8IZ52 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHPFQ8IZ52 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CHPFQ8IZ52 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHPFQ8IZ52 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHPFQ8IZ52 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHPFQ8IZ52 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHPFQ8IZ52 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.95■■□□□ 1.26
CHPFQ8IZ52 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHPFQ8IZ52 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.95■■□□□ 1.26
CHPFQ8IZ52 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
CHPFQ8IZ52 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.95■■□□□ 1.26
CHPFQ8IZ52 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.95■■□□□ 1.26
CHPFQ8IZ52 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.94■■□□□ 1.26
CHPFQ8IZ52 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CHPFQ8IZ52 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CHPFQ8IZ52 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHPFQ8IZ52 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.94■■□□□ 1.26
CHPFQ8IZ52 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CHPFQ8IZ52 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.94■■□□□ 1.26
CHPFQ8IZ52 AC092666.2-201ENST00000613287 246 ntBASIC22.94■■□□□ 1.26
CHPFQ8IZ52 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.94■■□□□ 1.26
CHPFQ8IZ52 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
CHPFQ8IZ52 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.93■■□□□ 1.26
CHPFQ8IZ52 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CHPFQ8IZ52 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms