Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFA11Q86Y39 BX842568.3-201ENST00000418104 571 ntBASIC17.52■□□□□ 0.4
NDUFA11Q86Y39 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.52■□□□□ 0.4
NDUFA11Q86Y39 AC097381.1-201ENST00000429019 1296 ntBASIC17.52■□□□□ 0.4
NDUFA11Q86Y39 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.52■□□□□ 0.4
NDUFA11Q86Y39 MIR3181-201ENST00000578512 73 ntBASIC17.52■□□□□ 0.4
NDUFA11Q86Y39 AC233992.3-201ENST00000607491 485 ntBASIC17.52■□□□□ 0.4
NDUFA11Q86Y39 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFA11Q86Y39 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.52■□□□□ 0.4
NDUFA11Q86Y39 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.52■□□□□ 0.4
NDUFA11Q86Y39 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.52■□□□□ 0.4
NDUFA11Q86Y39 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFA11Q86Y39 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.52■□□□□ 0.39
NDUFA11Q86Y39 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
NDUFA11Q86Y39 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.51■□□□□ 0.39
NDUFA11Q86Y39 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.51■□□□□ 0.39
NDUFA11Q86Y39 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NDUFA11Q86Y39 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFA11Q86Y39 AC006455.2-201ENST00000429931 906 ntBASIC17.51■□□□□ 0.39
NDUFA11Q86Y39 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFA11Q86Y39 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFA11Q86Y39 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFA11Q86Y39 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.51■□□□□ 0.39
NDUFA11Q86Y39 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFA11Q86Y39 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.51■□□□□ 0.39
NDUFA11Q86Y39 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
NDUFA11Q86Y39 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFA11Q86Y39 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.5■□□□□ 0.39
NDUFA11Q86Y39 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFA11Q86Y39 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFA11Q86Y39 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFA11Q86Y39 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.5■□□□□ 0.39
NDUFA11Q86Y39 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.5■□□□□ 0.39
NDUFA11Q86Y39 ALDH1A3-203ENST00000557963 1670 ntBASIC17.5■□□□□ 0.39
NDUFA11Q86Y39 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NDUFA11Q86Y39 HLA-L-211ENST00000482052 1765 ntBASIC17.5■□□□□ 0.39
NDUFA11Q86Y39 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.5■□□□□ 0.39
NDUFA11Q86Y39 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFA11Q86Y39 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFA11Q86Y39 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NDUFA11Q86Y39 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
NDUFA11Q86Y39 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.49■□□□□ 0.39
NDUFA11Q86Y39 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFA11Q86Y39 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
NDUFA11Q86Y39 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NDUFA11Q86Y39 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.49■□□□□ 0.39
NDUFA11Q86Y39 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NDUFA11Q86Y39 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.49■□□□□ 0.39
NDUFA11Q86Y39 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.48■□□□□ 0.39
NDUFA11Q86Y39 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA11Q86Y39 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NDUFA11Q86Y39 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.48■□□□□ 0.39
NDUFA11Q86Y39 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.48■□□□□ 0.39
NDUFA11Q86Y39 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.48■□□□□ 0.39
NDUFA11Q86Y39 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.48■□□□□ 0.39
NDUFA11Q86Y39 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.48■□□□□ 0.39
NDUFA11Q86Y39 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA11Q86Y39 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
NDUFA11Q86Y39 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA11Q86Y39 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA11Q86Y39 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 AC093323.1-202ENST00000635031 2045 ntBASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 AC141586.4-201ENST00000624558 1573 ntBASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA11Q86Y39 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.46■□□□□ 0.39
NDUFA11Q86Y39 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA11Q86Y39 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
NDUFA11Q86Y39 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA11Q86Y39 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
NDUFA11Q86Y39 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA11Q86Y39 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.46■□□□□ 0.39
NDUFA11Q86Y39 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.46■□□□□ 0.39
NDUFA11Q86Y39 pRNA.6-201ENST00000610482 90 ntBASIC17.46■□□□□ 0.39
NDUFA11Q86Y39 pRNA.5-201ENST00000612139 90 ntBASIC17.46■□□□□ 0.39
NDUFA11Q86Y39 pRNA.11-201ENST00000618423 90 ntBASIC17.46■□□□□ 0.39
NDUFA11Q86Y39 pRNA.13-201ENST00000619112 90 ntBASIC17.46■□□□□ 0.39
NDUFA11Q86Y39 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA11Q86Y39 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA11Q86Y39 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA11Q86Y39 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.46■□□□□ 0.39
NDUFA11Q86Y39 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NDUFA11Q86Y39 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA11Q86Y39 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
NDUFA11Q86Y39 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.45■□□□□ 0.38
NDUFA11Q86Y39 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms