Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
COL23A1Q86Y22 KRT18P61-201ENST00000585825 1298 ntBASIC28.85■■■□□ 2.21
COL23A1Q86Y22 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
COL23A1Q86Y22 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
COL23A1Q86Y22 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL23A1Q86Y22 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.84■■■□□ 2.21
COL23A1Q86Y22 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL23A1Q86Y22 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
COL23A1Q86Y22 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL23A1Q86Y22 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC28.84■■■□□ 2.21
COL23A1Q86Y22 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL23A1Q86Y22 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.84■■■□□ 2.21
COL23A1Q86Y22 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL23A1Q86Y22 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
COL23A1Q86Y22 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL23A1Q86Y22 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC28.83■■■□□ 2.21
COL23A1Q86Y22 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL23A1Q86Y22 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL23A1Q86Y22 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL23A1Q86Y22 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL23A1Q86Y22 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
COL23A1Q86Y22 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 AC073111.5-205ENST00000641717 521 ntBASIC28.82■■■□□ 2.2
COL23A1Q86Y22 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
COL23A1Q86Y22 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
COL23A1Q86Y22 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC28.81■■■□□ 2.2
COL23A1Q86Y22 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
COL23A1Q86Y22 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC28.81■■■□□ 2.2
COL23A1Q86Y22 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
COL23A1Q86Y22 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC28.81■■■□□ 2.2
COL23A1Q86Y22 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28.8■■■□□ 2.2
COL23A1Q86Y22 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC28.8■■■□□ 2.2
COL23A1Q86Y22 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
COL23A1Q86Y22 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC28.8■■■□□ 2.2
COL23A1Q86Y22 AC104771.1-201ENST00000603335 964 ntBASIC28.8■■■□□ 2.2
COL23A1Q86Y22 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
COL23A1Q86Y22 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC28.79■■■□□ 2.2
COL23A1Q86Y22 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
COL23A1Q86Y22 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC28.79■■■□□ 2.2
COL23A1Q86Y22 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
COL23A1Q86Y22 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC28.79■■■□□ 2.2
COL23A1Q86Y22 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC28.79■■■□□ 2.2
COL23A1Q86Y22 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 MAP2K4P1-201ENST00000438453 1195 ntBASIC28.78■■■□□ 2.2
COL23A1Q86Y22 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
COL23A1Q86Y22 AC141586.4-201ENST00000624558 1573 ntBASIC28.77■■■□□ 2.2
COL23A1Q86Y22 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
COL23A1Q86Y22 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
COL23A1Q86Y22 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
COL23A1Q86Y22 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
COL23A1Q86Y22 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.76■■■□□ 2.2
COL23A1Q86Y22 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
COL23A1Q86Y22 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC28.76■■■□□ 2.19
COL23A1Q86Y22 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
COL23A1Q86Y22 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
COL23A1Q86Y22 NT5C3AP1-201ENST00000394500 1012 ntBASIC28.76■■■□□ 2.19
COL23A1Q86Y22 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
COL23A1Q86Y22 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC28.76■■■□□ 2.19
COL23A1Q86Y22 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
COL23A1Q86Y22 PPP1R14BP3-201ENST00000509033 445 ntBASIC28.75■■■□□ 2.19
COL23A1Q86Y22 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC28.75■■■□□ 2.19
COL23A1Q86Y22 AC010525.1-201ENST00000585559 441 ntBASIC28.75■■■□□ 2.19
COL23A1Q86Y22 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC28.75■■■□□ 2.19
COL23A1Q86Y22 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
COL23A1Q86Y22 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 SLC6A10P-202ENST00000431994 2058 ntBASIC28.73■■■□□ 2.19
COL23A1Q86Y22 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
COL23A1Q86Y22 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
COL23A1Q86Y22 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC28.73■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms