Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
COL23A1Q86Y22 KRT18P61-201ENST00000585825 1298 ntBASIC28.85■■■□□ 2.21
COL23A1Q86Y22 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
COL23A1Q86Y22 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
COL23A1Q86Y22 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL23A1Q86Y22 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.84■■■□□ 2.21
COL23A1Q86Y22 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL23A1Q86Y22 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
COL23A1Q86Y22 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL23A1Q86Y22 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC28.84■■■□□ 2.21
COL23A1Q86Y22 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL23A1Q86Y22 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.84■■■□□ 2.21
COL23A1Q86Y22 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
COL23A1Q86Y22 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
COL23A1Q86Y22 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL23A1Q86Y22 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC28.83■■■□□ 2.21
COL23A1Q86Y22 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL23A1Q86Y22 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL23A1Q86Y22 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL23A1Q86Y22 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
COL23A1Q86Y22 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
COL23A1Q86Y22 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 AC073111.5-205ENST00000641717 521 ntBASIC28.82■■■□□ 2.2
COL23A1Q86Y22 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
COL23A1Q86Y22 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
COL23A1Q86Y22 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
COL23A1Q86Y22 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC28.81■■■□□ 2.2
COL23A1Q86Y22 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
COL23A1Q86Y22 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC28.81■■■□□ 2.2
COL23A1Q86Y22 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
COL23A1Q86Y22 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC28.81■■■□□ 2.2
COL23A1Q86Y22 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28.8■■■□□ 2.2
COL23A1Q86Y22 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC28.8■■■□□ 2.2
COL23A1Q86Y22 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
COL23A1Q86Y22 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC28.8■■■□□ 2.2
COL23A1Q86Y22 AC104771.1-201ENST00000603335 964 ntBASIC28.8■■■□□ 2.2
COL23A1Q86Y22 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
COL23A1Q86Y22 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC28.79■■■□□ 2.2
COL23A1Q86Y22 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
COL23A1Q86Y22 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC28.79■■■□□ 2.2
COL23A1Q86Y22 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
COL23A1Q86Y22 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC28.79■■■□□ 2.2
COL23A1Q86Y22 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC28.79■■■□□ 2.2
COL23A1Q86Y22 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 MAP2K4P1-201ENST00000438453 1195 ntBASIC28.78■■■□□ 2.2
COL23A1Q86Y22 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.78■■■□□ 2.2
COL23A1Q86Y22 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
COL23A1Q86Y22 AC141586.4-201ENST00000624558 1573 ntBASIC28.77■■■□□ 2.2
COL23A1Q86Y22 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
COL23A1Q86Y22 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
COL23A1Q86Y22 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
COL23A1Q86Y22 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
COL23A1Q86Y22 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.76■■■□□ 2.2
COL23A1Q86Y22 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
COL23A1Q86Y22 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC28.76■■■□□ 2.19
COL23A1Q86Y22 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
COL23A1Q86Y22 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
COL23A1Q86Y22 NT5C3AP1-201ENST00000394500 1012 ntBASIC28.76■■■□□ 2.19
COL23A1Q86Y22 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
COL23A1Q86Y22 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC28.76■■■□□ 2.19
COL23A1Q86Y22 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
COL23A1Q86Y22 PPP1R14BP3-201ENST00000509033 445 ntBASIC28.75■■■□□ 2.19
COL23A1Q86Y22 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC28.75■■■□□ 2.19
COL23A1Q86Y22 AC010525.1-201ENST00000585559 441 ntBASIC28.75■■■□□ 2.19
COL23A1Q86Y22 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC28.75■■■□□ 2.19
COL23A1Q86Y22 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
COL23A1Q86Y22 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL23A1Q86Y22 SLC6A10P-202ENST00000431994 2058 ntBASIC28.73■■■□□ 2.19
COL23A1Q86Y22 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
COL23A1Q86Y22 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
COL23A1Q86Y22 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC28.73■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms