Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.16■■□□□ 1.3
C12orf40Q86WS4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
C12orf40Q86WS4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.16■■□□□ 1.3
C12orf40Q86WS4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
C12orf40Q86WS4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
C12orf40Q86WS4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
C12orf40Q86WS4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
C12orf40Q86WS4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.15■■□□□ 1.3
C12orf40Q86WS4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
C12orf40Q86WS4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
C12orf40Q86WS4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
C12orf40Q86WS4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
C12orf40Q86WS4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.14■■□□□ 1.3
C12orf40Q86WS4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.14■■□□□ 1.3
C12orf40Q86WS4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
C12orf40Q86WS4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
C12orf40Q86WS4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.14■■□□□ 1.29
C12orf40Q86WS4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.14■■□□□ 1.29
C12orf40Q86WS4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
C12orf40Q86WS4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.13■■□□□ 1.29
C12orf40Q86WS4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.13■■□□□ 1.29
C12orf40Q86WS4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
C12orf40Q86WS4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
C12orf40Q86WS4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
C12orf40Q86WS4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.13■■□□□ 1.29
C12orf40Q86WS4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
C12orf40Q86WS4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.13■■□□□ 1.29
C12orf40Q86WS4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
C12orf40Q86WS4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.13■■□□□ 1.29
C12orf40Q86WS4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.13■■□□□ 1.29
C12orf40Q86WS4 pRNA.6-201ENST00000610482 90 ntBASIC23.13■■□□□ 1.29
C12orf40Q86WS4 pRNA.5-201ENST00000612139 90 ntBASIC23.13■■□□□ 1.29
C12orf40Q86WS4 pRNA.11-201ENST00000618423 90 ntBASIC23.13■■□□□ 1.29
C12orf40Q86WS4 pRNA.13-201ENST00000619112 90 ntBASIC23.13■■□□□ 1.29
C12orf40Q86WS4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.13■■□□□ 1.29
C12orf40Q86WS4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.13■■□□□ 1.29
C12orf40Q86WS4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
C12orf40Q86WS4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
C12orf40Q86WS4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
C12orf40Q86WS4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
C12orf40Q86WS4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
C12orf40Q86WS4 AC142381.3-201ENST00000568208 1670 ntBASIC23.12■■□□□ 1.29
C12orf40Q86WS4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
C12orf40Q86WS4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
C12orf40Q86WS4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
C12orf40Q86WS4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
C12orf40Q86WS4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
C12orf40Q86WS4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.11■■□□□ 1.29
C12orf40Q86WS4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.11■■□□□ 1.29
C12orf40Q86WS4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.11■■□□□ 1.29
C12orf40Q86WS4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
C12orf40Q86WS4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
C12orf40Q86WS4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
C12orf40Q86WS4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
C12orf40Q86WS4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
C12orf40Q86WS4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.1■■□□□ 1.29
C12orf40Q86WS4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
C12orf40Q86WS4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
C12orf40Q86WS4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
C12orf40Q86WS4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
C12orf40Q86WS4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.09■■□□□ 1.29
C12orf40Q86WS4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
C12orf40Q86WS4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
C12orf40Q86WS4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.09■■□□□ 1.29
C12orf40Q86WS4 AC233992.3-201ENST00000607491 485 ntBASIC23.09■■□□□ 1.29
C12orf40Q86WS4 MIR5787-201ENST00000611784 55 ntBASIC23.09■■□□□ 1.29
C12orf40Q86WS4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
C12orf40Q86WS4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
C12orf40Q86WS4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
C12orf40Q86WS4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.08■■□□□ 1.29
C12orf40Q86WS4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
C12orf40Q86WS4 BX842568.3-201ENST00000418104 571 ntBASIC23.08■■□□□ 1.29
C12orf40Q86WS4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.08■■□□□ 1.29
C12orf40Q86WS4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
C12orf40Q86WS4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
C12orf40Q86WS4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
C12orf40Q86WS4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
C12orf40Q86WS4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.08■■□□□ 1.28
C12orf40Q86WS4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.07■■□□□ 1.28
C12orf40Q86WS4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.07■■□□□ 1.28
C12orf40Q86WS4 AC141586.4-201ENST00000624558 1573 ntBASIC23.07■■□□□ 1.28
C12orf40Q86WS4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.07■■□□□ 1.28
C12orf40Q86WS4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
C12orf40Q86WS4 AC092666.2-201ENST00000613287 246 ntBASIC23.07■■□□□ 1.28
C12orf40Q86WS4 AC020928.2-201ENST00000588717 2197 ntBASIC23.07■■□□□ 1.28
C12orf40Q86WS4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
C12orf40Q86WS4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.06■■□□□ 1.28
C12orf40Q86WS4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
C12orf40Q86WS4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
C12orf40Q86WS4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
C12orf40Q86WS4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.06■■□□□ 1.28
C12orf40Q86WS4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.06■■□□□ 1.28
C12orf40Q86WS4 MIR6821-201ENST00000617625 74 ntBASIC23.06■■□□□ 1.28
C12orf40Q86WS4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
C12orf40Q86WS4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
C12orf40Q86WS4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
C12orf40Q86WS4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
C12orf40Q86WS4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
C12orf40Q86WS4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
C12orf40Q86WS4 IRS3P-201ENST00000223076 1006 ntBASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms