Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL55Q7Z7F7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC14.44□□□□□ -0.1
MRPL55Q7Z7F7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC14.44□□□□□ -0.1
MRPL55Q7Z7F7 AC120024.1-201ENST00000562672 995 ntBASIC14.44□□□□□ -0.1
MRPL55Q7Z7F7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC14.44□□□□□ -0.1
MRPL55Q7Z7F7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
MRPL55Q7Z7F7 AC068473.5-201ENST00000616428 2072 ntBASIC14.44□□□□□ -0.1
MRPL55Q7Z7F7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL55Q7Z7F7 AC133561.1-201ENST00000568600 2415 ntBASIC14.44□□□□□ -0.1
MRPL55Q7Z7F7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL55Q7Z7F7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL55Q7Z7F7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL55Q7Z7F7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MRPL55Q7Z7F7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MRPL55Q7Z7F7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
MRPL55Q7Z7F7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MRPL55Q7Z7F7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC14.43□□□□□ -0.1
MRPL55Q7Z7F7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
MRPL55Q7Z7F7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
MRPL55Q7Z7F7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
MRPL55Q7Z7F7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
MRPL55Q7Z7F7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MRPL55Q7Z7F7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MRPL55Q7Z7F7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
MRPL55Q7Z7F7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MRPL55Q7Z7F7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
MRPL55Q7Z7F7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MRPL55Q7Z7F7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
MRPL55Q7Z7F7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MRPL55Q7Z7F7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 ALDH1A3-203ENST00000557963 1670 ntBASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 AC131274.2-201ENST00000580697 1507 ntBASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 KRT18P24-201ENST00000344739 1156 ntBASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 ANOS2P-203ENST00000472227 1816 ntBASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MRPL55Q7Z7F7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
MRPL55Q7Z7F7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MRPL55Q7Z7F7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
MRPL55Q7Z7F7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC14.41□□□□□ -0.1
MRPL55Q7Z7F7 AC010980.1-201ENST00000587192 1142 ntBASIC14.41□□□□□ -0.1
MRPL55Q7Z7F7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC14.41□□□□□ -0.1
MRPL55Q7Z7F7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC14.41□□□□□ -0.1
MRPL55Q7Z7F7 AC012354.3-201ENST00000623734 483 ntBASIC14.41□□□□□ -0.1
MRPL55Q7Z7F7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC14.41□□□□□ -0.1
MRPL55Q7Z7F7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC14.41□□□□□ -0.1
MRPL55Q7Z7F7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL55Q7Z7F7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MRPL55Q7Z7F7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MRPL55Q7Z7F7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MRPL55Q7Z7F7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 LBH-205ENST00000407930 756 ntTSL 2 BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MRPL55Q7Z7F7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 AC092068.2-201ENST00000590491 1708 ntBASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 MIR4281-201ENST00000580852 62 ntBASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
MRPL55Q7Z7F7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms