Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHMP1BQ7LBR1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHMP1BQ7LBR1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP1BQ7LBR1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP1BQ7LBR1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.64■□□□□ 0.89
CHMP1BQ7LBR1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CHMP1BQ7LBR1 LINC00543-201ENST00000567234 1845 ntBASIC20.64■□□□□ 0.89
CHMP1BQ7LBR1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP1BQ7LBR1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP1BQ7LBR1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP1BQ7LBR1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP1BQ7LBR1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP1BQ7LBR1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP1BQ7LBR1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP1BQ7LBR1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP1BQ7LBR1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP1BQ7LBR1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.63■□□□□ 0.89
CHMP1BQ7LBR1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP1BQ7LBR1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP1BQ7LBR1 AL117332.1-201ENST00000622628 974 ntBASIC20.63■□□□□ 0.89
CHMP1BQ7LBR1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.63■□□□□ 0.89
CHMP1BQ7LBR1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP1BQ7LBR1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.62■□□□□ 0.89
CHMP1BQ7LBR1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP1BQ7LBR1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CHMP1BQ7LBR1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP1BQ7LBR1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP1BQ7LBR1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP1BQ7LBR1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP1BQ7LBR1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.62■□□□□ 0.89
CHMP1BQ7LBR1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CHMP1BQ7LBR1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.62■□□□□ 0.89
CHMP1BQ7LBR1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP1BQ7LBR1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP1BQ7LBR1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CHMP1BQ7LBR1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP1BQ7LBR1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP1BQ7LBR1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP1BQ7LBR1 AC005703.6-201ENST00000623265 1329 ntBASIC20.61■□□□□ 0.89
CHMP1BQ7LBR1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMP1BQ7LBR1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP1BQ7LBR1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP1BQ7LBR1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP1BQ7LBR1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP1BQ7LBR1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP1BQ7LBR1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP1BQ7LBR1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP1BQ7LBR1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.61■□□□□ 0.89
CHMP1BQ7LBR1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.6■□□□□ 0.89
CHMP1BQ7LBR1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.6■□□□□ 0.89
CHMP1BQ7LBR1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP1BQ7LBR1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP1BQ7LBR1 HLA-L-211ENST00000482052 1765 ntBASIC20.6■□□□□ 0.89
CHMP1BQ7LBR1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP1BQ7LBR1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CHMP1BQ7LBR1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.6■□□□□ 0.89
CHMP1BQ7LBR1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.6■□□□□ 0.89
CHMP1BQ7LBR1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.6■□□□□ 0.89
CHMP1BQ7LBR1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.6■□□□□ 0.89
CHMP1BQ7LBR1 MIR3621-201ENST00000580529 85 ntBASIC20.6■□□□□ 0.89
CHMP1BQ7LBR1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.6■□□□□ 0.89
CHMP1BQ7LBR1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP1BQ7LBR1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.6■□□□□ 0.89
CHMP1BQ7LBR1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP1BQ7LBR1 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.59■□□□□ 0.89
CHMP1BQ7LBR1 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.59■□□□□ 0.89
CHMP1BQ7LBR1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP1BQ7LBR1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP1BQ7LBR1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP1BQ7LBR1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP1BQ7LBR1 AC131274.2-201ENST00000580697 1507 ntBASIC20.59■□□□□ 0.89
CHMP1BQ7LBR1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP1BQ7LBR1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP1BQ7LBR1 AL161729.1-201ENST00000604104 1402 ntBASIC20.59■□□□□ 0.89
CHMP1BQ7LBR1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.59■□□□□ 0.89
CHMP1BQ7LBR1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP1BQ7LBR1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP1BQ7LBR1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP1BQ7LBR1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.58■□□□□ 0.89
CHMP1BQ7LBR1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.58■□□□□ 0.89
CHMP1BQ7LBR1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMP1BQ7LBR1 AC138932.3-201ENST00000567634 1902 ntBASIC20.58■□□□□ 0.88
CHMP1BQ7LBR1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMP1BQ7LBR1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMP1BQ7LBR1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP1BQ7LBR1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP1BQ7LBR1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.57■□□□□ 0.88
CHMP1BQ7LBR1 AC079834.2-201ENST00000609776 1949 ntBASIC20.57■□□□□ 0.88
CHMP1BQ7LBR1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CHMP1BQ7LBR1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP1BQ7LBR1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.57■□□□□ 0.88
CHMP1BQ7LBR1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.57■□□□□ 0.88
CHMP1BQ7LBR1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP1BQ7LBR1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.57■□□□□ 0.88
CHMP1BQ7LBR1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.57■□□□□ 0.88
CHMP1BQ7LBR1 AL139125.2-201ENST00000623134 1869 ntBASIC20.57■□□□□ 0.88
CHMP1BQ7LBR1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CHMP1BQ7LBR1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CHMP1BQ7LBR1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.57■□□□□ 0.88
CHMP1BQ7LBR1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms