Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VPS13CQ709C8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
VPS13CQ709C8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS13CQ709C8 MIR3181-201ENST00000578512 73 ntBASIC19.05■□□□□ 0.64
VPS13CQ709C8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VPS13CQ709C8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.05■□□□□ 0.64
VPS13CQ709C8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS13CQ709C8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS13CQ709C8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
VPS13CQ709C8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.05■□□□□ 0.64
VPS13CQ709C8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
VPS13CQ709C8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS13CQ709C8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.05■□□□□ 0.64
VPS13CQ709C8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.05■□□□□ 0.64
VPS13CQ709C8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.05■□□□□ 0.64
VPS13CQ709C8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
VPS13CQ709C8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VPS13CQ709C8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS13CQ709C8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS13CQ709C8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS13CQ709C8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS13CQ709C8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.04■□□□□ 0.64
VPS13CQ709C8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
VPS13CQ709C8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VPS13CQ709C8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS13CQ709C8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS13CQ709C8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
VPS13CQ709C8 AC142086.6-201ENST00000621154 1765 ntBASIC19.03■□□□□ 0.64
VPS13CQ709C8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.03■□□□□ 0.64
VPS13CQ709C8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.03■□□□□ 0.64
VPS13CQ709C8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS13CQ709C8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.03■□□□□ 0.64
VPS13CQ709C8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS13CQ709C8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS13CQ709C8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.03■□□□□ 0.64
VPS13CQ709C8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS13CQ709C8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
VPS13CQ709C8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS13CQ709C8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VPS13CQ709C8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS13CQ709C8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
VPS13CQ709C8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS13CQ709C8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.02■□□□□ 0.64
VPS13CQ709C8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS13CQ709C8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.02■□□□□ 0.64
VPS13CQ709C8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VPS13CQ709C8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VPS13CQ709C8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
VPS13CQ709C8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.02■□□□□ 0.63
VPS13CQ709C8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS13CQ709C8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.01■□□□□ 0.63
VPS13CQ709C8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS13CQ709C8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS13CQ709C8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.01■□□□□ 0.63
VPS13CQ709C8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
VPS13CQ709C8 NME4-202ENST00000382940 766 ntTSL 3 BASIC19■□□□□ 0.63
VPS13CQ709C8 BX842568.3-201ENST00000418104 571 ntBASIC19■□□□□ 0.63
VPS13CQ709C8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
VPS13CQ709C8 pRNA.6-201ENST00000610482 90 ntBASIC19■□□□□ 0.63
VPS13CQ709C8 pRNA.5-201ENST00000612139 90 ntBASIC19■□□□□ 0.63
VPS13CQ709C8 pRNA.11-201ENST00000618423 90 ntBASIC19■□□□□ 0.63
VPS13CQ709C8 pRNA.13-201ENST00000619112 90 ntBASIC19■□□□□ 0.63
VPS13CQ709C8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19■□□□□ 0.63
VPS13CQ709C8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19■□□□□ 0.63
VPS13CQ709C8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
VPS13CQ709C8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
VPS13CQ709C8 CROCCP5-201ENST00000436658 830 ntBASIC19■□□□□ 0.63
VPS13CQ709C8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19■□□□□ 0.63
VPS13CQ709C8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19■□□□□ 0.63
VPS13CQ709C8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.99■□□□□ 0.63
VPS13CQ709C8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.99■□□□□ 0.63
VPS13CQ709C8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VPS13CQ709C8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.99■□□□□ 0.63
VPS13CQ709C8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
VPS13CQ709C8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.99■□□□□ 0.63
VPS13CQ709C8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
VPS13CQ709C8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
VPS13CQ709C8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
VPS13CQ709C8 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.98■□□□□ 0.63
VPS13CQ709C8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.98■□□□□ 0.63
VPS13CQ709C8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS13CQ709C8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.98■□□□□ 0.63
VPS13CQ709C8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS13CQ709C8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS13CQ709C8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS13CQ709C8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.98■□□□□ 0.63
VPS13CQ709C8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
VPS13CQ709C8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS13CQ709C8 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.98■□□□□ 0.63
VPS13CQ709C8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.98■□□□□ 0.63
VPS13CQ709C8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.98■□□□□ 0.63
VPS13CQ709C8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.98■□□□□ 0.63
VPS13CQ709C8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
VPS13CQ709C8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.98■□□□□ 0.63
VPS13CQ709C8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
VPS13CQ709C8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS13CQ709C8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.98■□□□□ 0.63
VPS13CQ709C8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS13CQ709C8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS13CQ709C8 AC012414.1-201ENST00000556676 535 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms