Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTL4Q6ZR62 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTL4Q6ZR62 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTL4Q6ZR62 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.03■□□□□ 0.96
RTL4Q6ZR62 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RTL4Q6ZR62 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.03■□□□□ 0.96
RTL4Q6ZR62 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTL4Q6ZR62 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.03■□□□□ 0.96
RTL4Q6ZR62 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTL4Q6ZR62 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTL4Q6ZR62 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTL4Q6ZR62 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTL4Q6ZR62 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RTL4Q6ZR62 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTL4Q6ZR62 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTL4Q6ZR62 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.02■□□□□ 0.96
RTL4Q6ZR62 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTL4Q6ZR62 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTL4Q6ZR62 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTL4Q6ZR62 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RTL4Q6ZR62 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RTL4Q6ZR62 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.01■□□□□ 0.95
RTL4Q6ZR62 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTL4Q6ZR62 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
RTL4Q6ZR62 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTL4Q6ZR62 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTL4Q6ZR62 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTL4Q6ZR62 AL136116.3-201ENST00000402907 1138 ntBASIC21.01■□□□□ 0.95
RTL4Q6ZR62 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RTL4Q6ZR62 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTL4Q6ZR62 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RTL4Q6ZR62 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RTL4Q6ZR62 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTL4Q6ZR62 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTL4Q6ZR62 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21■□□□□ 0.95
RTL4Q6ZR62 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTL4Q6ZR62 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21■□□□□ 0.95
RTL4Q6ZR62 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RTL4Q6ZR62 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21■□□□□ 0.95
RTL4Q6ZR62 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21■□□□□ 0.95
RTL4Q6ZR62 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21■□□□□ 0.95
RTL4Q6ZR62 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTL4Q6ZR62 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21■□□□□ 0.95
RTL4Q6ZR62 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RTL4Q6ZR62 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTL4Q6ZR62 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.99■□□□□ 0.95
RTL4Q6ZR62 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTL4Q6ZR62 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.99■□□□□ 0.95
RTL4Q6ZR62 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTL4Q6ZR62 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RTL4Q6ZR62 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTL4Q6ZR62 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.99■□□□□ 0.95
RTL4Q6ZR62 AL512631.2-201ENST00000604634 923 ntBASIC20.99■□□□□ 0.95
RTL4Q6ZR62 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTL4Q6ZR62 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.99■□□□□ 0.95
RTL4Q6ZR62 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTL4Q6ZR62 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTL4Q6ZR62 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTL4Q6ZR62 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.98■□□□□ 0.95
RTL4Q6ZR62 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTL4Q6ZR62 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTL4Q6ZR62 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RTL4Q6ZR62 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTL4Q6ZR62 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTL4Q6ZR62 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RTL4Q6ZR62 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTL4Q6ZR62 ABCB10P4-201ENST00000566803 2184 ntBASIC20.98■□□□□ 0.95
RTL4Q6ZR62 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms