Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LCN1P1Q5VSP4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LCN1P1Q5VSP4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LCN1P1Q5VSP4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.33■□□□□ 0.85
LCN1P1Q5VSP4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
LCN1P1Q5VSP4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LCN1P1Q5VSP4 AC011551.1-201ENST00000614101 683 ntBASIC20.33■□□□□ 0.85
LCN1P1Q5VSP4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LCN1P1Q5VSP4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LCN1P1Q5VSP4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LCN1P1Q5VSP4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LCN1P1Q5VSP4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LCN1P1Q5VSP4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCN1P1Q5VSP4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LCN1P1Q5VSP4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCN1P1Q5VSP4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCN1P1Q5VSP4 DUX4L9-201ENST00000449051 1259 ntBASIC20.32■□□□□ 0.84
LCN1P1Q5VSP4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.32■□□□□ 0.84
LCN1P1Q5VSP4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
LCN1P1Q5VSP4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.32■□□□□ 0.84
LCN1P1Q5VSP4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCN1P1Q5VSP4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCN1P1Q5VSP4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LCN1P1Q5VSP4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.32■□□□□ 0.84
LCN1P1Q5VSP4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.31■□□□□ 0.84
LCN1P1Q5VSP4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCN1P1Q5VSP4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCN1P1Q5VSP4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LCN1P1Q5VSP4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCN1P1Q5VSP4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LCN1P1Q5VSP4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.31■□□□□ 0.84
LCN1P1Q5VSP4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LCN1P1Q5VSP4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LCN1P1Q5VSP4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LCN1P1Q5VSP4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCN1P1Q5VSP4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCN1P1Q5VSP4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
LCN1P1Q5VSP4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCN1P1Q5VSP4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.3■□□□□ 0.84
LCN1P1Q5VSP4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCN1P1Q5VSP4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCN1P1Q5VSP4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCN1P1Q5VSP4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCN1P1Q5VSP4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.3■□□□□ 0.84
LCN1P1Q5VSP4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.29■□□□□ 0.84
LCN1P1Q5VSP4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
LCN1P1Q5VSP4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LCN1P1Q5VSP4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCN1P1Q5VSP4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCN1P1Q5VSP4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCN1P1Q5VSP4 LONRF2P2-201ENST00000439212 571 ntBASIC20.29■□□□□ 0.84
LCN1P1Q5VSP4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCN1P1Q5VSP4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCN1P1Q5VSP4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LCN1P1Q5VSP4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LCN1P1Q5VSP4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LCN1P1Q5VSP4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LCN1P1Q5VSP4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.28■□□□□ 0.84
LCN1P1Q5VSP4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LCN1P1Q5VSP4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.28■□□□□ 0.84
LCN1P1Q5VSP4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LCN1P1Q5VSP4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LCN1P1Q5VSP4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LCN1P1Q5VSP4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LCN1P1Q5VSP4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LCN1P1Q5VSP4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCN1P1Q5VSP4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCN1P1Q5VSP4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.27■□□□□ 0.84
LCN1P1Q5VSP4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LCN1P1Q5VSP4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.27■□□□□ 0.84
LCN1P1Q5VSP4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCN1P1Q5VSP4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCN1P1Q5VSP4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.27■□□□□ 0.84
LCN1P1Q5VSP4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
LCN1P1Q5VSP4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.27■□□□□ 0.84
LCN1P1Q5VSP4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LCN1P1Q5VSP4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LCN1P1Q5VSP4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LCN1P1Q5VSP4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCN1P1Q5VSP4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCN1P1Q5VSP4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCN1P1Q5VSP4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LCN1P1Q5VSP4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms