Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ATPAF1Q5TC12 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATPAF1Q5TC12 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATPAF1Q5TC12 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ATPAF1Q5TC12 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATPAF1Q5TC12 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATPAF1Q5TC12 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ATPAF1Q5TC12 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATPAF1Q5TC12 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.47■□□□□ 0.71
ATPAF1Q5TC12 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ATPAF1Q5TC12 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ATPAF1Q5TC12 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATPAF1Q5TC12 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATPAF1Q5TC12 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATPAF1Q5TC12 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATPAF1Q5TC12 AL031848.2-201ENST00000607670 837 ntBASIC19.47■□□□□ 0.71
ATPAF1Q5TC12 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATPAF1Q5TC12 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATPAF1Q5TC12 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATPAF1Q5TC12 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATPAF1Q5TC12 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
ATPAF1Q5TC12 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATPAF1Q5TC12 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATPAF1Q5TC12 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATPAF1Q5TC12 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATPAF1Q5TC12 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.46■□□□□ 0.71
ATPAF1Q5TC12 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATPAF1Q5TC12 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.46■□□□□ 0.71
ATPAF1Q5TC12 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATPAF1Q5TC12 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATPAF1Q5TC12 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
ATPAF1Q5TC12 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ATPAF1Q5TC12 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATPAF1Q5TC12 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.45■□□□□ 0.7
ATPAF1Q5TC12 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATPAF1Q5TC12 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATPAF1Q5TC12 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF1Q5TC12 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF1Q5TC12 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ATPAF1Q5TC12 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF1Q5TC12 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF1Q5TC12 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ATPAF1Q5TC12 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.44■□□□□ 0.7
ATPAF1Q5TC12 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ATPAF1Q5TC12 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF1Q5TC12 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATPAF1Q5TC12 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ATPAF1Q5TC12 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATPAF1Q5TC12 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATPAF1Q5TC12 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATPAF1Q5TC12 MIR4281-201ENST00000580852 62 ntBASIC19.43■□□□□ 0.7
ATPAF1Q5TC12 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATPAF1Q5TC12 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATPAF1Q5TC12 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATPAF1Q5TC12 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATPAF1Q5TC12 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATPAF1Q5TC12 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATPAF1Q5TC12 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.42■□□□□ 0.7
ATPAF1Q5TC12 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATPAF1Q5TC12 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
ATPAF1Q5TC12 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.42■□□□□ 0.7
ATPAF1Q5TC12 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATPAF1Q5TC12 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATPAF1Q5TC12 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATPAF1Q5TC12 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATPAF1Q5TC12 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATPAF1Q5TC12 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATPAF1Q5TC12 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATPAF1Q5TC12 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATPAF1Q5TC12 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.41■□□□□ 0.7
ATPAF1Q5TC12 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATPAF1Q5TC12 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATPAF1Q5TC12 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATPAF1Q5TC12 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 AC137630.3-201ENST00000607245 391 ntBASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATPAF1Q5TC12 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATPAF1Q5TC12 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
ATPAF1Q5TC12 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.39■□□□□ 0.69
ATPAF1Q5TC12 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATPAF1Q5TC12 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.39■□□□□ 0.69
ATPAF1Q5TC12 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
ATPAF1Q5TC12 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATPAF1Q5TC12 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms