Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.33■■■□□ 2.61
CDCA8Q53HL2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.6
CDCA8Q53HL2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CDCA8Q53HL2 UNC93B3-201ENST00000308076 687 ntBASIC31.32■■■□□ 2.6
CDCA8Q53HL2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CDCA8Q53HL2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
CDCA8Q53HL2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CDCA8Q53HL2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CDCA8Q53HL2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CDCA8Q53HL2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
CDCA8Q53HL2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CDCA8Q53HL2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CDCA8Q53HL2 AC133561.4-201ENST00000566112 224 ntBASIC31.31■■■□□ 2.6
CDCA8Q53HL2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CDCA8Q53HL2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CDCA8Q53HL2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CDCA8Q53HL2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CDCA8Q53HL2 SYT6-210ENST00000641643 1587 ntBASIC31.3■■■□□ 2.6
CDCA8Q53HL2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDCA8Q53HL2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
CDCA8Q53HL2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC31.29■■■□□ 2.6
CDCA8Q53HL2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC31.29■■■□□ 2.6
CDCA8Q53HL2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC31.29■■■□□ 2.6
CDCA8Q53HL2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CDCA8Q53HL2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CDCA8Q53HL2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC31.29■■■□□ 2.6
CDCA8Q53HL2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
CDCA8Q53HL2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CDCA8Q53HL2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CDCA8Q53HL2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CDCA8Q53HL2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CDCA8Q53HL2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
CDCA8Q53HL2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CDCA8Q53HL2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC31.28■■■□□ 2.6
CDCA8Q53HL2 AL138724.1-201ENST00000606771 1088 ntBASIC31.28■■■□□ 2.6
CDCA8Q53HL2 AC106739.1-201ENST00000617035 715 ntBASIC31.28■■■□□ 2.6
CDCA8Q53HL2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC31.27■■■□□ 2.6
CDCA8Q53HL2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC31.27■■■□□ 2.6
CDCA8Q53HL2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
CDCA8Q53HL2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC31.27■■■□□ 2.6
CDCA8Q53HL2 FP325331.1-202ENST00000623531 1380 ntBASIC31.27■■■□□ 2.6
CDCA8Q53HL2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDCA8Q53HL2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CDCA8Q53HL2 MIR638-201ENST00000385237 100 ntBASIC31.26■■■□□ 2.59
CDCA8Q53HL2 AL136162.1-201ENST00000607711 1078 ntBASIC31.26■■■□□ 2.59
CDCA8Q53HL2 AC009086.3-201ENST00000623486 1008 ntBASIC31.26■■■□□ 2.59
CDCA8Q53HL2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC31.26■■■□□ 2.59
CDCA8Q53HL2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC31.26■■■□□ 2.59
CDCA8Q53HL2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
CDCA8Q53HL2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
CDCA8Q53HL2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
CDCA8Q53HL2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC31.25■■■□□ 2.59
CDCA8Q53HL2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDCA8Q53HL2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
CDCA8Q53HL2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDCA8Q53HL2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDCA8Q53HL2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDCA8Q53HL2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CDCA8Q53HL2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CDCA8Q53HL2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
CDCA8Q53HL2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CDCA8Q53HL2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CDCA8Q53HL2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC31.24■■■□□ 2.59
CDCA8Q53HL2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC31.24■■■□□ 2.59
CDCA8Q53HL2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC31.24■■■□□ 2.59
CDCA8Q53HL2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CDCA8Q53HL2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC31.24■■■□□ 2.59
CDCA8Q53HL2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
CDCA8Q53HL2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CDCA8Q53HL2 ABCB10P4-201ENST00000566803 2184 ntBASIC31.24■■■□□ 2.59
CDCA8Q53HL2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CDCA8Q53HL2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CDCA8Q53HL2 AC135279.3-201ENST00000610945 1311 ntBASIC31.24■■■□□ 2.59
CDCA8Q53HL2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CDCA8Q53HL2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
CDCA8Q53HL2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC31.23■■■□□ 2.59
CDCA8Q53HL2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC31.23■■■□□ 2.59
CDCA8Q53HL2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC31.23■■■□□ 2.59
CDCA8Q53HL2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CDCA8Q53HL2 PBX2P1-201ENST00000493219 1291 ntBASIC31.23■■■□□ 2.59
CDCA8Q53HL2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
CDCA8Q53HL2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CDCA8Q53HL2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
CDCA8Q53HL2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC31.22■■■□□ 2.59
CDCA8Q53HL2 SERBP1P1-201ENST00000396021 1160 ntBASIC31.22■■■□□ 2.59
CDCA8Q53HL2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
CDCA8Q53HL2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CDCA8Q53HL2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC31.22■■■□□ 2.59
CDCA8Q53HL2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC31.22■■■□□ 2.59
CDCA8Q53HL2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CDCA8Q53HL2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDCA8Q53HL2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDCA8Q53HL2 PTCHD3P2-201ENST00000424937 1205 ntBASIC31.21■■■□□ 2.59
CDCA8Q53HL2 AC011298.3-201ENST00000615796 283 ntBASIC31.21■■■□□ 2.59
CDCA8Q53HL2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CDCA8Q53HL2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDCA8Q53HL2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDCA8Q53HL2 AC144652.1-201ENST00000609974 1624 ntBASIC31.2■■■□□ 2.59
CDCA8Q53HL2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
CDCA8Q53HL2 AC024257.2-201ENST00000549699 147 ntBASIC31.2■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms