Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 KRT18P6-201ENST00000555540 1265 ntBASIC22.16■■□□□ 1.14
RSPO4Q2I0M5 KRT18P61-201ENST00000585825 1298 ntBASIC22.16■■□□□ 1.14
RSPO4Q2I0M5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.16■■□□□ 1.14
RSPO4Q2I0M5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.16■■□□□ 1.14
RSPO4Q2I0M5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RSPO4Q2I0M5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.16■■□□□ 1.14
RSPO4Q2I0M5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RSPO4Q2I0M5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
RSPO4Q2I0M5 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RSPO4Q2I0M5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.15■■□□□ 1.14
RSPO4Q2I0M5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.15■■□□□ 1.14
RSPO4Q2I0M5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RSPO4Q2I0M5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RSPO4Q2I0M5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.15■■□□□ 1.14
RSPO4Q2I0M5 AP005435.1-201ENST00000529293 1178 ntBASIC22.15■■□□□ 1.14
RSPO4Q2I0M5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RSPO4Q2I0M5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.15■■□□□ 1.14
RSPO4Q2I0M5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RSPO4Q2I0M5 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
RSPO4Q2I0M5 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RSPO4Q2I0M5 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RSPO4Q2I0M5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.14■■□□□ 1.13
RSPO4Q2I0M5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
RSPO4Q2I0M5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.14■■□□□ 1.13
RSPO4Q2I0M5 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RSPO4Q2I0M5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RSPO4Q2I0M5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.13■■□□□ 1.13
RSPO4Q2I0M5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.13■■□□□ 1.13
RSPO4Q2I0M5 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RSPO4Q2I0M5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.13■■□□□ 1.13
RSPO4Q2I0M5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
RSPO4Q2I0M5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.13■■□□□ 1.13
RSPO4Q2I0M5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.13■■□□□ 1.13
RSPO4Q2I0M5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.13■■□□□ 1.13
RSPO4Q2I0M5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.13■■□□□ 1.13
RSPO4Q2I0M5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
RSPO4Q2I0M5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.13■■□□□ 1.13
RSPO4Q2I0M5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.13■■□□□ 1.13
RSPO4Q2I0M5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RSPO4Q2I0M5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.12■■□□□ 1.13
RSPO4Q2I0M5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
RSPO4Q2I0M5 MIR663A-201ENST00000385250 93 ntBASIC22.12■■□□□ 1.13
RSPO4Q2I0M5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.12■■□□□ 1.13
RSPO4Q2I0M5 FAM201B-201ENST00000458407 597 ntBASIC22.12■■□□□ 1.13
RSPO4Q2I0M5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.12■■□□□ 1.13
RSPO4Q2I0M5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.12■■□□□ 1.13
RSPO4Q2I0M5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RSPO4Q2I0M5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RSPO4Q2I0M5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RSPO4Q2I0M5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.11■■□□□ 1.13
RSPO4Q2I0M5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.11■■□□□ 1.13
RSPO4Q2I0M5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.11■■□□□ 1.13
RSPO4Q2I0M5 LINC01003-201ENST00000564834 1764 ntBASIC22.11■■□□□ 1.13
RSPO4Q2I0M5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RSPO4Q2I0M5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RSPO4Q2I0M5 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
RSPO4Q2I0M5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RSPO4Q2I0M5 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.1■■□□□ 1.13
RSPO4Q2I0M5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RSPO4Q2I0M5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RSPO4Q2I0M5 AC142086.2-201ENST00000569753 217 ntBASIC22.1■■□□□ 1.13
RSPO4Q2I0M5 MIR4651-201ENST00000582622 73 ntBASIC22.1■■□□□ 1.13
RSPO4Q2I0M5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
RSPO4Q2I0M5 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
RSPO4Q2I0M5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RSPO4Q2I0M5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.09■■□□□ 1.13
RSPO4Q2I0M5 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RSPO4Q2I0M5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RSPO4Q2I0M5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.09■■□□□ 1.13
RSPO4Q2I0M5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RSPO4Q2I0M5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
RSPO4Q2I0M5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.09■■□□□ 1.13
RSPO4Q2I0M5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
RSPO4Q2I0M5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
RSPO4Q2I0M5 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
RSPO4Q2I0M5 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RSPO4Q2I0M5 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
RSPO4Q2I0M5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RSPO4Q2I0M5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.08■■□□□ 1.13
RSPO4Q2I0M5 AC131274.2-201ENST00000580697 1507 ntBASIC22.08■■□□□ 1.13
RSPO4Q2I0M5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
RSPO4Q2I0M5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.13
RSPO4Q2I0M5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.08■■□□□ 1.13
RSPO4Q2I0M5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.08■■□□□ 1.13
RSPO4Q2I0M5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.13
RSPO4Q2I0M5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
RSPO4Q2I0M5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.07■■□□□ 1.12
RSPO4Q2I0M5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RSPO4Q2I0M5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.07■■□□□ 1.12
RSPO4Q2I0M5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RSPO4Q2I0M5 AC008687.6-201ENST00000596318 630 ntBASIC22.07■■□□□ 1.12
RSPO4Q2I0M5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.07■■□□□ 1.12
RSPO4Q2I0M5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.06■■□□□ 1.12
RSPO4Q2I0M5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RSPO4Q2I0M5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.06■■□□□ 1.12
RSPO4Q2I0M5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.06■■□□□ 1.12
RSPO4Q2I0M5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RSPO4Q2I0M5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.06■■□□□ 1.12
RSPO4Q2I0M5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.06■■□□□ 1.12
RSPO4Q2I0M5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms