Protein–RNA interactions for Protein: P79483

HLA-DRB3, HLA class II histocompatibility antigen, DR beta 3 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB3P79483 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRB3P79483 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DRB3P79483 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HLA-DRB3P79483 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
HLA-DRB3P79483 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HLA-DRB3P79483 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.84■□□□□ 0.61
HLA-DRB3P79483 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRB3P79483 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRB3P79483 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRB3P79483 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HLA-DRB3P79483 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HLA-DRB3P79483 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HLA-DRB3P79483 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.84■□□□□ 0.61
HLA-DRB3P79483 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HLA-DRB3P79483 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.84■□□□□ 0.61
HLA-DRB3P79483 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRB3P79483 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.84■□□□□ 0.61
HLA-DRB3P79483 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRB3P79483 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DRB3P79483 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DRB3P79483 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.83■□□□□ 0.61
HLA-DRB3P79483 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DRB3P79483 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.83■□□□□ 0.6
HLA-DRB3P79483 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DRB3P79483 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DRB3P79483 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DRB3P79483 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DRB3P79483 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DRB3P79483 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DRB3P79483 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DRB3P79483 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DRB3P79483 AL117328.2-201ENST00000624617 1940 ntBASIC18.82■□□□□ 0.6
HLA-DRB3P79483 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DRB3P79483 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRB3P79483 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRB3P79483 MIR4281-201ENST00000580852 62 ntBASIC18.82■□□□□ 0.6
HLA-DRB3P79483 THA1P-201ENST00000590384 1145 ntBASIC18.82■□□□□ 0.6
HLA-DRB3P79483 AC074183.2-201ENST00000623112 922 ntBASIC18.82■□□□□ 0.6
HLA-DRB3P79483 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
HLA-DRB3P79483 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRB3P79483 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRB3P79483 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DRB3P79483 AC233723.2-201ENST00000623798 2106 ntBASIC18.82■□□□□ 0.6
HLA-DRB3P79483 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRB3P79483 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRB3P79483 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRB3P79483 AC004987.1-201ENST00000428627 508 ntBASIC18.81■□□□□ 0.6
HLA-DRB3P79483 ATP5G2P3-201ENST00000429083 425 ntBASIC18.81■□□□□ 0.6
HLA-DRB3P79483 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRB3P79483 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRB3P79483 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRB3P79483 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRB3P79483 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRB3P79483 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DRB3P79483 AF131216.4-201ENST00000638924 1588 ntBASIC18.81■□□□□ 0.6
HLA-DRB3P79483 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRB3P79483 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRB3P79483 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRB3P79483 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
HLA-DRB3P79483 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRB3P79483 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRB3P79483 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DRB3P79483 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRB3P79483 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRB3P79483 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HLA-DRB3P79483 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRB3P79483 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HLA-DRB3P79483 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DRB3P79483 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRB3P79483 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
HLA-DRB3P79483 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DRB3P79483 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DRB3P79483 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRB3P79483 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
HLA-DRB3P79483 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRB3P79483 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRB3P79483 KRT18P24-201ENST00000344739 1156 ntBASIC18.79■□□□□ 0.6
HLA-DRB3P79483 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.79■□□□□ 0.6
HLA-DRB3P79483 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.79■□□□□ 0.6
HLA-DRB3P79483 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRB3P79483 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRB3P79483 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRB3P79483 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DRB3P79483 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRB3P79483 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRB3P79483 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DRB3P79483 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DRB3P79483 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DRB3P79483 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.78■□□□□ 0.6
HLA-DRB3P79483 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.78■□□□□ 0.6
HLA-DRB3P79483 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DRB3P79483 C1orf229-201ENST00000623686 2258 ntBASIC18.78■□□□□ 0.6
HLA-DRB3P79483 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DRB3P79483 PVT1_1.1-201ENST00000615125 194 ntBASIC18.78■□□□□ 0.6
HLA-DRB3P79483 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HLA-DRB3P79483 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DRB3P79483 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
HLA-DRB3P79483 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HLA-DRB3P79483 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRB3P79483 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms