Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSM6P62312 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
LSM6P62312 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSM6P62312 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.85■□□□□ 0.77
LSM6P62312 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSM6P62312 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.85■□□□□ 0.77
LSM6P62312 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.85■□□□□ 0.77
LSM6P62312 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSM6P62312 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LSM6P62312 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.85■□□□□ 0.77
LSM6P62312 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.85■□□□□ 0.77
LSM6P62312 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
LSM6P62312 AC092028.1-203ENST00000608262 953 ntBASIC19.85■□□□□ 0.77
LSM6P62312 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.85■□□□□ 0.77
LSM6P62312 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.85■□□□□ 0.77
LSM6P62312 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LSM6P62312 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.85■□□□□ 0.77
LSM6P62312 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSM6P62312 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.85■□□□□ 0.77
LSM6P62312 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSM6P62312 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LSM6P62312 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LSM6P62312 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.85■□□□□ 0.77
LSM6P62312 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.84■□□□□ 0.77
LSM6P62312 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.84■□□□□ 0.77
LSM6P62312 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSM6P62312 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LSM6P62312 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSM6P62312 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LSM6P62312 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSM6P62312 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LSM6P62312 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LSM6P62312 AC005703.6-201ENST00000623265 1329 ntBASIC19.83■□□□□ 0.77
LSM6P62312 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LSM6P62312 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LSM6P62312 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LSM6P62312 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LSM6P62312 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
LSM6P62312 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.83■□□□□ 0.77
LSM6P62312 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
LSM6P62312 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LSM6P62312 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LSM6P62312 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LSM6P62312 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.82■□□□□ 0.76
LSM6P62312 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.82■□□□□ 0.76
LSM6P62312 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.82■□□□□ 0.76
LSM6P62312 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LSM6P62312 AC012676.1-201ENST00000574705 1949 ntBASIC19.82■□□□□ 0.76
LSM6P62312 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LSM6P62312 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LSM6P62312 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LSM6P62312 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LSM6P62312 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.81■□□□□ 0.76
LSM6P62312 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.81■□□□□ 0.76
LSM6P62312 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
LSM6P62312 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LSM6P62312 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.81■□□□□ 0.76
LSM6P62312 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.81■□□□□ 0.76
LSM6P62312 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LSM6P62312 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LSM6P62312 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
LSM6P62312 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LSM6P62312 AC068473.5-201ENST00000616428 2072 ntBASIC19.8■□□□□ 0.76
LSM6P62312 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.8■□□□□ 0.76
LSM6P62312 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LSM6P62312 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
LSM6P62312 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LSM6P62312 AC009299.2-201ENST00000482477 511 ntBASIC19.8■□□□□ 0.76
LSM6P62312 MIR4787-201ENST00000607364 84 ntBASIC19.8■□□□□ 0.76
LSM6P62312 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LSM6P62312 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
LSM6P62312 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LSM6P62312 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LSM6P62312 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM6P62312 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.79■□□□□ 0.76
LSM6P62312 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM6P62312 AC239859.2-201ENST00000444165 318 ntBASIC19.79■□□□□ 0.76
LSM6P62312 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
LSM6P62312 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LSM6P62312 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
LSM6P62312 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.79■□□□□ 0.76
LSM6P62312 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LSM6P62312 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LSM6P62312 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
LSM6P62312 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.78■□□□□ 0.76
LSM6P62312 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM6P62312 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
LSM6P62312 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM6P62312 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM6P62312 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LSM6P62312 AL451085.2-201ENST00000605085 799 ntBASIC19.78■□□□□ 0.76
LSM6P62312 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LSM6P62312 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
LSM6P62312 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM6P62312 AC079630.1-202ENST00000618127 1840 ntBASIC19.78■□□□□ 0.76
LSM6P62312 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.78■□□□□ 0.76
LSM6P62312 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LSM6P62312 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LSM6P62312 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.77■□□□□ 0.76
LSM6P62312 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms