Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCR4P61073 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCR4P61073 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.6■□□□□ 0.89
CXCR4P61073 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCR4P61073 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.6■□□□□ 0.89
CXCR4P61073 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.59■□□□□ 0.89
CXCR4P61073 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.59■□□□□ 0.89
CXCR4P61073 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.59■□□□□ 0.89
CXCR4P61073 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CXCR4P61073 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.59■□□□□ 0.89
CXCR4P61073 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CXCR4P61073 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
CXCR4P61073 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CXCR4P61073 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CXCR4P61073 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.58■□□□□ 0.89
CXCR4P61073 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
CXCR4P61073 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CXCR4P61073 AC026202.3-201ENST00000600805 1127 ntBASIC20.58■□□□□ 0.89
CXCR4P61073 AL137060.1-201ENST00000618151 2648 ntBASIC20.58■□□□□ 0.89
CXCR4P61073 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CXCR4P61073 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CXCR4P61073 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CXCR4P61073 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CXCR4P61073 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CXCR4P61073 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CXCR4P61073 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CXCR4P61073 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CXCR4P61073 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CXCR4P61073 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CXCR4P61073 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CXCR4P61073 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CXCR4P61073 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CXCR4P61073 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CXCR4P61073 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CXCR4P61073 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.56■□□□□ 0.88
CXCR4P61073 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.56■□□□□ 0.88
CXCR4P61073 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXCR4P61073 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.56■□□□□ 0.88
CXCR4P61073 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.56■□□□□ 0.88
CXCR4P61073 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXCR4P61073 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXCR4P61073 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXCR4P61073 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXCR4P61073 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXCR4P61073 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CXCR4P61073 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CXCR4P61073 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CXCR4P61073 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CXCR4P61073 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CXCR4P61073 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.55■□□□□ 0.88
CXCR4P61073 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CXCR4P61073 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CXCR4P61073 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CXCR4P61073 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CXCR4P61073 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CXCR4P61073 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.55■□□□□ 0.88
CXCR4P61073 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXCR4P61073 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXCR4P61073 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CXCR4P61073 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXCR4P61073 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.54■□□□□ 0.88
CXCR4P61073 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXCR4P61073 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CXCR4P61073 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CXCR4P61073 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.53■□□□□ 0.88
CXCR4P61073 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXCR4P61073 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXCR4P61073 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CXCR4P61073 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXCR4P61073 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXCR4P61073 GPX1-201ENST00000419349 1106 ntBASIC20.53■□□□□ 0.88
CXCR4P61073 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CXCR4P61073 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.53■□□□□ 0.88
CXCR4P61073 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.53■□□□□ 0.88
CXCR4P61073 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXCR4P61073 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.53■□□□□ 0.88
CXCR4P61073 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXCR4P61073 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CXCR4P61073 C11orf96-202ENST00000528572 1834 ntBASIC20.53■□□□□ 0.88
CXCR4P61073 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CXCR4P61073 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CXCR4P61073 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CXCR4P61073 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.52■□□□□ 0.88
CXCR4P61073 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CXCR4P61073 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CXCR4P61073 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CXCR4P61073 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CXCR4P61073 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CXCR4P61073 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CXCR4P61073 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.52■□□□□ 0.88
CXCR4P61073 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.52■□□□□ 0.88
CXCR4P61073 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CXCR4P61073 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.52■□□□□ 0.88
CXCR4P61073 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CXCR4P61073 AC092053.2-201ENST00000640557 1818 ntBASIC20.52■□□□□ 0.88
CXCR4P61073 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CXCR4P61073 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CXCR4P61073 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.52■□□□□ 0.87
CXCR4P61073 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CXCR4P61073 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms