Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
DEFA3P59666 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DEFA3P59666 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
DEFA3P59666 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
DEFA3P59666 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.85■□□□□ 0.77
DEFA3P59666 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.85■□□□□ 0.77
DEFA3P59666 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DEFA3P59666 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DEFA3P59666 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DEFA3P59666 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.84■□□□□ 0.77
DEFA3P59666 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DEFA3P59666 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
DEFA3P59666 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DEFA3P59666 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DEFA3P59666 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
DEFA3P59666 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DEFA3P59666 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DEFA3P59666 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
DEFA3P59666 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DEFA3P59666 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.83■□□□□ 0.77
DEFA3P59666 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DEFA3P59666 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DEFA3P59666 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
DEFA3P59666 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
DEFA3P59666 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
DEFA3P59666 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
DEFA3P59666 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
DEFA3P59666 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
DEFA3P59666 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
DEFA3P59666 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
DEFA3P59666 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
DEFA3P59666 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
DEFA3P59666 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
DEFA3P59666 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DEFA3P59666 AL391121.1-201ENST00000607967 1349 ntBASIC19.82■□□□□ 0.76
DEFA3P59666 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
DEFA3P59666 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
DEFA3P59666 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DEFA3P59666 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.82■□□□□ 0.76
DEFA3P59666 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.82■□□□□ 0.76
DEFA3P59666 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.82■□□□□ 0.76
DEFA3P59666 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
DEFA3P59666 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DEFA3P59666 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEFA3P59666 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEFA3P59666 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
DEFA3P59666 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DEFA3P59666 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
DEFA3P59666 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEFA3P59666 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
DEFA3P59666 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
DEFA3P59666 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEFA3P59666 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
DEFA3P59666 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEFA3P59666 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEFA3P59666 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEFA3P59666 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
DEFA3P59666 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEFA3P59666 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEFA3P59666 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEFA3P59666 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DEFA3P59666 C11orf96-202ENST00000528572 1834 ntBASIC19.81■□□□□ 0.76
DEFA3P59666 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DEFA3P59666 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.8■□□□□ 0.76
DEFA3P59666 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DEFA3P59666 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DEFA3P59666 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DEFA3P59666 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.8■□□□□ 0.76
DEFA3P59666 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.8■□□□□ 0.76
DEFA3P59666 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DEFA3P59666 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DEFA3P59666 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
DEFA3P59666 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.79■□□□□ 0.76
DEFA3P59666 RNF165-205ENST00000588679 2904 ntBASIC19.79■□□□□ 0.76
DEFA3P59666 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
DEFA3P59666 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
DEFA3P59666 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.79■□□□□ 0.76
DEFA3P59666 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DEFA3P59666 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.79■□□□□ 0.76
DEFA3P59666 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DEFA3P59666 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DEFA3P59666 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.78■□□□□ 0.76
DEFA3P59666 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
DEFA3P59666 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DEFA3P59666 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
DEFA3P59666 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.78■□□□□ 0.76
DEFA3P59666 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DEFA3P59666 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.78■□□□□ 0.76
DEFA3P59666 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
DEFA3P59666 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.78■□□□□ 0.76
DEFA3P59666 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
DEFA3P59666 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
DEFA3P59666 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
DEFA3P59666 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DEFA3P59666 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DEFA3P59666 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
DEFA3P59666 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
DEFA3P59666 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.77■□□□□ 0.76
DEFA3P59666 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.77■□□□□ 0.76
DEFA3P59666 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms