Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MPST-208ENST00000628507 698 ntTSL 5 BASIC32.81■■■□□ 2.84
CLTCL1P53675 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC32.81■■■□□ 2.84
CLTCL1P53675 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CLTCL1P53675 IRS3P-201ENST00000223076 1006 ntBASIC32.8■■■□□ 2.84
CLTCL1P53675 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC32.8■■■□□ 2.84
CLTCL1P53675 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC32.8■■■□□ 2.84
CLTCL1P53675 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC32.8■■■□□ 2.84
CLTCL1P53675 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
CLTCL1P53675 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC32.8■■■□□ 2.84
CLTCL1P53675 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC32.8■■■□□ 2.84
CLTCL1P53675 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC32.8■■■□□ 2.84
CLTCL1P53675 pRNA.6-201ENST00000610482 90 ntBASIC32.8■■■□□ 2.84
CLTCL1P53675 pRNA.5-201ENST00000612139 90 ntBASIC32.8■■■□□ 2.84
CLTCL1P53675 pRNA.11-201ENST00000618423 90 ntBASIC32.8■■■□□ 2.84
CLTCL1P53675 pRNA.13-201ENST00000619112 90 ntBASIC32.8■■■□□ 2.84
CLTCL1P53675 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CLTCL1P53675 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC32.79■■■□□ 2.84
CLTCL1P53675 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC32.79■■■□□ 2.84
CLTCL1P53675 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC32.79■■■□□ 2.84
CLTCL1P53675 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
CLTCL1P53675 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC32.78■■■□□ 2.84
CLTCL1P53675 AL031602.1-201ENST00000633169 911 ntBASIC32.78■■■□□ 2.84
CLTCL1P53675 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
CLTCL1P53675 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
CLTCL1P53675 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.78■■■□□ 2.84
CLTCL1P53675 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC32.78■■■□□ 2.84
CLTCL1P53675 HACD1-201ENST00000326961 773 ntTSL 2 BASIC32.77■■■□□ 2.84
CLTCL1P53675 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC32.77■■■□□ 2.84
CLTCL1P53675 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC32.77■■■□□ 2.84
CLTCL1P53675 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC32.77■■■□□ 2.84
CLTCL1P53675 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
CLTCL1P53675 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
CLTCL1P53675 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
CLTCL1P53675 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
CLTCL1P53675 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC32.75■■■□□ 2.83
CLTCL1P53675 AP003733.4-201ENST00000623785 1697 ntBASIC32.75■■■□□ 2.83
CLTCL1P53675 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
CLTCL1P53675 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC32.75■■■□□ 2.83
CLTCL1P53675 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC32.75■■■□□ 2.83
CLTCL1P53675 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC32.75■■■□□ 2.83
CLTCL1P53675 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CLTCL1P53675 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
CLTCL1P53675 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC32.74■■■□□ 2.83
CLTCL1P53675 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC32.74■■■□□ 2.83
CLTCL1P53675 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC32.74■■■□□ 2.83
CLTCL1P53675 SHF-207ENST00000560540 2062 ntTSL 5 BASIC32.74■■■□□ 2.83
CLTCL1P53675 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC32.74■■■□□ 2.83
CLTCL1P53675 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CLTCL1P53675 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CLTCL1P53675 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC32.73■■■□□ 2.83
CLTCL1P53675 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC32.73■■■□□ 2.83
CLTCL1P53675 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC32.73■■■□□ 2.83
CLTCL1P53675 AC141586.4-201ENST00000624558 1573 ntBASIC32.73■■■□□ 2.83
CLTCL1P53675 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CLTCL1P53675 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC32.73■■■□□ 2.83
CLTCL1P53675 GRAMD4P2-201ENST00000423297 1097 ntBASIC32.73■■■□□ 2.83
CLTCL1P53675 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC32.73■■■□□ 2.83
CLTCL1P53675 SP2-202ENST00000613139 908 ntTSL 5 BASIC32.73■■■□□ 2.83
CLTCL1P53675 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC32.72■■■□□ 2.83
CLTCL1P53675 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC32.72■■■□□ 2.83
CLTCL1P53675 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC32.72■■■□□ 2.83
CLTCL1P53675 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC32.72■■■□□ 2.83
CLTCL1P53675 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CLTCL1P53675 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CLTCL1P53675 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CLTCL1P53675 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
CLTCL1P53675 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CLTCL1P53675 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CLTCL1P53675 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CLTCL1P53675 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CLTCL1P53675 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC32.7■■■□□ 2.83
CLTCL1P53675 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
CLTCL1P53675 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
CLTCL1P53675 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC32.7■■■□□ 2.83
CLTCL1P53675 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC32.7■■■□□ 2.82
CLTCL1P53675 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CLTCL1P53675 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
CLTCL1P53675 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
CLTCL1P53675 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CLTCL1P53675 TSPY26P-201ENST00000476365 1326 ntBASIC32.68■■■□□ 2.82
CLTCL1P53675 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC32.68■■■□□ 2.82
CLTCL1P53675 AC138932.3-201ENST00000567634 1902 ntBASIC32.68■■■□□ 2.82
CLTCL1P53675 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC32.68■■■□□ 2.82
CLTCL1P53675 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CLTCL1P53675 AC027612.3-201ENST00000413684 1047 ntBASIC32.68■■■□□ 2.82
CLTCL1P53675 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC32.68■■■□□ 2.82
CLTCL1P53675 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
CLTCL1P53675 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CLTCL1P53675 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC32.67■■■□□ 2.82
CLTCL1P53675 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC32.67■■■□□ 2.82
CLTCL1P53675 IGHV3-19-201ENST00000521488 291 ntBASIC32.67■■■□□ 2.82
CLTCL1P53675 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CLTCL1P53675 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CLTCL1P53675 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CLTCL1P53675 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC32.67■■■□□ 2.82
CLTCL1P53675 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC32.67■■■□□ 2.82
CLTCL1P53675 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC32.66■■■□□ 2.82
CLTCL1P53675 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC32.66■■■□□ 2.82
CLTCL1P53675 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC32.66■■■□□ 2.82
CLTCL1P53675 EI24-213ENST00000618552 1747 ntTSL 5 BASIC32.66■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms