Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.18■■□□□ 1.78
LBX1P52954 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
LBX1P52954 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.18■■□□□ 1.78
LBX1P52954 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.18■■□□□ 1.78
LBX1P52954 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC26.18■■□□□ 1.78
LBX1P52954 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC26.18■■□□□ 1.78
LBX1P52954 MDK-213ENST00000617138 635 ntTSL 2 BASIC26.18■■□□□ 1.78
LBX1P52954 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
LBX1P52954 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
LBX1P52954 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
LBX1P52954 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
LBX1P52954 AC004854.2-201ENST00000608450 1441 ntBASIC26.17■■□□□ 1.78
LBX1P52954 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
LBX1P52954 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.17■■□□□ 1.78
LBX1P52954 POU5F1P3-201ENST00000428824 1078 ntBASIC26.17■■□□□ 1.78
LBX1P52954 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
LBX1P52954 RGMA-211ENST00000557420 989 ntTSL 3 BASIC26.17■■□□□ 1.78
LBX1P52954 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
LBX1P52954 RPS2P52-201ENST00000469610 820 ntBASIC26.16■■□□□ 1.78
LBX1P52954 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC26.16■■□□□ 1.78
LBX1P52954 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.16■■□□□ 1.78
LBX1P52954 SMUG1P1-201ENST00000590640 811 ntBASIC26.16■■□□□ 1.78
LBX1P52954 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
LBX1P52954 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.16■■□□□ 1.78
LBX1P52954 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.16■■□□□ 1.78
LBX1P52954 AC091060.1-201ENST00000623524 1766 ntBASIC26.15■■□□□ 1.78
LBX1P52954 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LBX1P52954 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.15■■□□□ 1.78
LBX1P52954 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
LBX1P52954 AL050303.2-201ENST00000619798 666 ntBASIC26.15■■□□□ 1.78
LBX1P52954 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
LBX1P52954 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LBX1P52954 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
LBX1P52954 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
LBX1P52954 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
LBX1P52954 PRORSD1P-201ENST00000295112 541 ntBASIC26.14■■□□□ 1.78
LBX1P52954 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
LBX1P52954 GUSBP6-202ENST00000438529 1198 ntBASIC26.14■■□□□ 1.78
LBX1P52954 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC26.14■■□□□ 1.78
LBX1P52954 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.14■■□□□ 1.78
LBX1P52954 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.14■■□□□ 1.78
LBX1P52954 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.14■■□□□ 1.78
LBX1P52954 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC26.14■■□□□ 1.78
LBX1P52954 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
LBX1P52954 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
LBX1P52954 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
LBX1P52954 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.13■■□□□ 1.77
LBX1P52954 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LBX1P52954 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
LBX1P52954 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC26.13■■□□□ 1.77
LBX1P52954 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.13■■□□□ 1.77
LBX1P52954 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.13■■□□□ 1.77
LBX1P52954 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
LBX1P52954 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
LBX1P52954 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC26.12■■□□□ 1.77
LBX1P52954 AC131274.2-201ENST00000580697 1507 ntBASIC26.12■■□□□ 1.77
LBX1P52954 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.12■■□□□ 1.77
LBX1P52954 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
LBX1P52954 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
LBX1P52954 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
LBX1P52954 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
LBX1P52954 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
LBX1P52954 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
LBX1P52954 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
LBX1P52954 SPI1-203ENST00000533030 661 ntTSL 2 BASIC26.11■■□□□ 1.77
LBX1P52954 TFG-210ENST00000620299 1289 ntTSL 5 BASIC26.11■■□□□ 1.77
LBX1P52954 AP006294.2-201ENST00000641667 209 ntBASIC26.11■■□□□ 1.77
LBX1P52954 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC26.11■■□□□ 1.77
LBX1P52954 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.11■■□□□ 1.77
LBX1P52954 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
LBX1P52954 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
LBX1P52954 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.1■■□□□ 1.77
LBX1P52954 DUX4L4-201ENST00000566884 1269 ntBASIC26.1■■□□□ 1.77
LBX1P52954 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.1■■□□□ 1.77
LBX1P52954 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
LBX1P52954 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.1■■□□□ 1.77
LBX1P52954 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
LBX1P52954 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
LBX1P52954 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
LBX1P52954 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.09■■□□□ 1.77
LBX1P52954 AP004609.3-201ENST00000610705 1884 ntBASIC26.09■■□□□ 1.77
LBX1P52954 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LBX1P52954 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC26.09■■□□□ 1.77
LBX1P52954 AL596275.1-201ENST00000423464 877 ntBASIC26.09■■□□□ 1.77
LBX1P52954 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.09■■□□□ 1.77
LBX1P52954 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
LBX1P52954 SLC7A5P2-201ENST00000553010 536 ntBASIC26.09■■□□□ 1.77
LBX1P52954 AC105233.4-201ENST00000642045 216 ntBASIC26.09■■□□□ 1.77
LBX1P52954 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
LBX1P52954 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
LBX1P52954 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.08■■□□□ 1.77
LBX1P52954 KRT19P1-201ENST00000405746 1186 ntBASIC26.08■■□□□ 1.77
LBX1P52954 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC26.08■■□□□ 1.77
LBX1P52954 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC26.08■■□□□ 1.77
LBX1P52954 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC26.08■■□□□ 1.77
LBX1P52954 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
LBX1P52954 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.07■■□□□ 1.76
LBX1P52954 PFKL-212ENST00000628044 129 ntTSL 3 BASIC26.07■■□□□ 1.76
LBX1P52954 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
LBX1P52954 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms