Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
POLR2JP52435 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POLR2JP52435 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
POLR2JP52435 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.59■■□□□ 1.05
POLR2JP52435 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
POLR2JP52435 LINC00565-201ENST00000562710 2331 ntBASIC21.59■■□□□ 1.05
POLR2JP52435 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POLR2JP52435 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.58■■□□□ 1.05
POLR2JP52435 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
POLR2JP52435 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.58■■□□□ 1.05
POLR2JP52435 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
POLR2JP52435 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
POLR2JP52435 RARRES2P2-201ENST00000394842 485 ntBASIC21.58■■□□□ 1.05
POLR2JP52435 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
POLR2JP52435 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.58■■□□□ 1.05
POLR2JP52435 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
POLR2JP52435 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
POLR2JP52435 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
POLR2JP52435 LINC00526-201ENST00000581067 1875 ntBASIC21.58■■□□□ 1.04
POLR2JP52435 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
POLR2JP52435 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.57■■□□□ 1.04
POLR2JP52435 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR2JP52435 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
POLR2JP52435 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.57■■□□□ 1.04
POLR2JP52435 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.57■■□□□ 1.04
POLR2JP52435 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR2JP52435 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
POLR2JP52435 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
POLR2JP52435 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.56■■□□□ 1.04
POLR2JP52435 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
POLR2JP52435 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
POLR2JP52435 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
POLR2JP52435 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
POLR2JP52435 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
POLR2JP52435 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.56■■□□□ 1.04
POLR2JP52435 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
POLR2JP52435 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR2JP52435 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.55■■□□□ 1.04
POLR2JP52435 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR2JP52435 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR2JP52435 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR2JP52435 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR2JP52435 AC022616.5-201ENST00000518796 181 ntBASIC21.55■■□□□ 1.04
POLR2JP52435 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
POLR2JP52435 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.55■■□□□ 1.04
POLR2JP52435 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR2JP52435 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.55■■□□□ 1.04
POLR2JP52435 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR2JP52435 ECEL1P1-201ENST00000373592 1742 ntBASIC21.55■■□□□ 1.04
POLR2JP52435 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
POLR2JP52435 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR2JP52435 KRT18P60-201ENST00000312876 1297 ntBASIC21.54■■□□□ 1.04
POLR2JP52435 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
POLR2JP52435 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.54■■□□□ 1.04
POLR2JP52435 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR2JP52435 AC019171.1-201ENST00000601251 1056 ntBASIC21.54■■□□□ 1.04
POLR2JP52435 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR2JP52435 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR2JP52435 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR2JP52435 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.54■■□□□ 1.04
POLR2JP52435 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR2JP52435 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR2JP52435 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
POLR2JP52435 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
POLR2JP52435 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
POLR2JP52435 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR2JP52435 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
POLR2JP52435 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR2JP52435 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR2JP52435 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
POLR2JP52435 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR2JP52435 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR2JP52435 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
POLR2JP52435 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.52■■□□□ 1.04
POLR2JP52435 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR2JP52435 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.52■■□□□ 1.04
POLR2JP52435 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.52■■□□□ 1.04
POLR2JP52435 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR2JP52435 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR2JP52435 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR2JP52435 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR2JP52435 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
POLR2JP52435 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
POLR2JP52435 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.51■■□□□ 1.03
POLR2JP52435 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
POLR2JP52435 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR2JP52435 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.51■■□□□ 1.03
POLR2JP52435 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR2JP52435 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR2JP52435 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR2JP52435 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.51■■□□□ 1.03
POLR2JP52435 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR2JP52435 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR2JP52435 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR2JP52435 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR2JP52435 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR2JP52435 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.5■■□□□ 1.03
POLR2JP52435 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.5■■□□□ 1.03
POLR2JP52435 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.5■■□□□ 1.03
POLR2JP52435 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms