Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDC34P49427 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDC34P49427 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDC34P49427 KRT18P10-201ENST00000388836 1287 ntBASIC17.79■□□□□ 0.44
CDC34P49427 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.79■□□□□ 0.44
CDC34P49427 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDC34P49427 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.79■□□□□ 0.44
CDC34P49427 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CDC34P49427 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC34P49427 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDC34P49427 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.78■□□□□ 0.44
CDC34P49427 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.78■□□□□ 0.44
CDC34P49427 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.78■□□□□ 0.44
CDC34P49427 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC34P49427 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.78■□□□□ 0.44
CDC34P49427 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC34P49427 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.78■□□□□ 0.44
CDC34P49427 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC34P49427 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC34P49427 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CDC34P49427 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CDC34P49427 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC34P49427 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDC34P49427 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC34P49427 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.77■□□□□ 0.44
CDC34P49427 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.77■□□□□ 0.44
CDC34P49427 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.77■□□□□ 0.44
CDC34P49427 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.77■□□□□ 0.44
CDC34P49427 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CDC34P49427 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.77■□□□□ 0.44
CDC34P49427 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.77■□□□□ 0.44
CDC34P49427 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC34P49427 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.77■□□□□ 0.43
CDC34P49427 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.77■□□□□ 0.43
CDC34P49427 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDC34P49427 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDC34P49427 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDC34P49427 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC34P49427 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDC34P49427 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC34P49427 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC34P49427 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CDC34P49427 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.76■□□□□ 0.43
CDC34P49427 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.76■□□□□ 0.43
CDC34P49427 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.76■□□□□ 0.43
CDC34P49427 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC34P49427 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC34P49427 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CDC34P49427 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDC34P49427 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.75■□□□□ 0.43
CDC34P49427 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CDC34P49427 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.75■□□□□ 0.43
CDC34P49427 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC34P49427 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC34P49427 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC34P49427 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.75■□□□□ 0.43
CDC34P49427 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC34P49427 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC34P49427 ESRRAP2-201ENST00000418437 1549 ntBASIC17.75■□□□□ 0.43
CDC34P49427 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
CDC34P49427 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDC34P49427 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CDC34P49427 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CDC34P49427 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDC34P49427 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.74■□□□□ 0.43
CDC34P49427 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC34P49427 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC34P49427 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC34P49427 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC34P49427 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.74■□□□□ 0.43
CDC34P49427 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC34P49427 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC34P49427 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC34P49427 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC34P49427 CR559946.2-201ENST00000623684 991 ntBASIC17.74■□□□□ 0.43
CDC34P49427 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDC34P49427 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC34P49427 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CDC34P49427 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.73■□□□□ 0.43
CDC34P49427 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC34P49427 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.73■□□□□ 0.43
CDC34P49427 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC34P49427 RP9P-202ENST00000450133 1212 ntBASIC17.73■□□□□ 0.43
CDC34P49427 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC34P49427 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC34P49427 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC34P49427 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDC34P49427 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC34P49427 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC34P49427 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.72■□□□□ 0.43
CDC34P49427 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.72■□□□□ 0.43
CDC34P49427 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC34P49427 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC34P49427 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC34P49427 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.72■□□□□ 0.43
CDC34P49427 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.72■□□□□ 0.43
CDC34P49427 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC34P49427 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC34P49427 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC34P49427 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms