Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	YHR070C-A	YHR070C-A	411 nt		5.26	□□□□□ -1.57
CAF16	P43569	SDS3	YIL084C	984 nt		5.26	□□□□□ -1.57
CAF16	P43569	MRPL15	YLR312W-A	762 nt		5.26	□□□□□ -1.57
CAF16	P43569	PDR16	YNL231C	1056 nt		5.26	□□□□□ -1.57
CAF16	P43569	MRPL23	YOR150W	492 nt		5.26	□□□□□ -1.57
CAF16	P43569	MCP1	YOR228C	909 nt		5.26	□□□□□ -1.57
CAF16	P43569	GLN1	YPR035W	1113 nt		5.26	□□□□□ -1.57
CAF16	P43569	ARO4	YBR249C	1113 nt		5.26	□□□□□ -1.57
CAF16	P43569	MID1	YNL291C	1647 nt		5.26	□□□□□ -1.57
CAF16	P43569	COX15	YER141W	1461 nt		5.26	□□□□□ -1.57
CAF16	P43569	MNN2	YBR015C	1794 nt		5.25	□□□□□ -1.57
CAF16	P43569	KIN28	YDL108W	921 nt		5.25	□□□□□ -1.57
CAF16	P43569	TRM8	YDL201W	861 nt		5.25	□□□□□ -1.57
CAF16	P43569	YDR391C	YDR391C	699 nt		5.25	□□□□□ -1.57
CAF16	P43569	FRA2	YGL220W	363 nt		5.25	□□□□□ -1.57
CAF16	P43569	SPO11	YHL022C	1197 nt		5.25	□□□□□ -1.57
CAF16	P43569	VTH1	YIL173W	4650 nt		5.25	□□□□□ -1.57
CAF16	P43569	VTH2	YJL222W	4650 nt		5.25	□□□□□ -1.57
CAF16	P43569	MEH1	YKR007W	555 nt		5.25	□□□□□ -1.57
CAF16	P43569	GSP1	YLR293C	660 nt		5.25	□□□□□ -1.57
CAF16	P43569	SCS7	YMR272C	1155 nt		5.25	□□□□□ -1.57
CAF16	P43569	YNR040W	YNR040W	771 nt		5.25	□□□□□ -1.57
CAF16	P43569	UFE1	YOR075W	1041 nt		5.25	□□□□□ -1.57
CAF16	P43569	LGE1	YPL055C	999 nt		5.25	□□□□□ -1.57
CAF16	P43569	CBP6	YBR120C	489 nt		5.25	□□□□□ -1.57
CAF16	P43569	RRN3	YKL125W	1884 nt		5.25	□□□□□ -1.57
CAF16	P43569	WTM2	YOR229W	1404 nt		5.24	□□□□□ -1.57
CAF16	P43569	NGL3	YML118W	1518 nt		5.24	□□□□□ -1.57
CAF16	P43569	MMT1	YMR177W	1533 nt		5.24	□□□□□ -1.57
CAF16	P43569	MDH3	YDL078C	1032 nt		5.24	□□□□□ -1.57
CAF16	P43569	PPH21	YDL134C	1110 nt		5.24	□□□□□ -1.57
CAF16	P43569	SNZ3	YFL059W	897 nt		5.24	□□□□□ -1.57
CAF16	P43569	KXD1	YGL079W	657 nt		5.24	□□□□□ -1.57
CAF16	P43569	VMA16	YHR026W	642 nt		5.24	□□□□□ -1.57
CAF16	P43569	HTD2	YHR067W	843 nt		5.24	□□□□□ -1.57
CAF16	P43569	SOL3	YHR163W	750 nt		5.24	□□□□□ -1.57
CAF16	P43569	YHR213W-B	YHR213W-B	300 nt		5.24	□□□□□ -1.57
CAF16	P43569	RPC25	YKL144C	639 nt		5.24	□□□□□ -1.57
CAF16	P43569	YAR064W	YAR064W	300 nt		5.24	□□□□□ -1.57
CAF16	P43569	SEC72	YLR292C	582 nt		5.24	□□□□□ -1.57
CAF16	P43569	CSR1	YLR380W	1227 nt		5.24	□□□□□ -1.57
CAF16	P43569	RIF2	YLR453C	1188 nt		5.24	□□□□□ -1.57
CAF16	P43569	SNZ2	YNL333W	897 nt		5.24	□□□□□ -1.57
CAF16	P43569	YOR111W	YOR111W	699 nt		5.24	□□□□□ -1.57
CAF16	P43569	ECM31	YBR176W	939 nt		5.24	□□□□□ -1.57
CAF16	P43569	KTR7	YIL085C	1554 nt		5.24	□□□□□ -1.57
CAF16	P43569	PHO90	YJL198W	2646 nt		5.24	□□□□□ -1.57
CAF16	P43569	SMF1	YOL122C	1728 nt		5.23	□□□□□ -1.57
CAF16	P43569	YDL012C	YDL012C	324 nt		5.23	□□□□□ -1.57
CAF16	P43569	KNH1	YDL049C	807 nt		5.23	□□□□□ -1.57
CAF16	P43569	TYS1	YGR185C	1185 nt		5.23	□□□□□ -1.57
CAF16	P43569	BOS1	YLR078C	735 nt		5.23	□□□□□ -1.57
CAF16	P43569	RPB8	YOR224C	441 nt		5.23	□□□□□ -1.57
CAF16	P43569	GRX5	YPL059W	453 nt		5.23	□□□□□ -1.57
CAF16	P43569	BMT2	YBR141C	1014 nt		5.23	□□□□□ -1.57
CAF16	P43569	ISN1	YOR155C	1353 nt		5.23	□□□□□ -1.57
CAF16	P43569	YBR139W	YBR139W	1527 nt		5.23	□□□□□ -1.57
CAF16	P43569	PUT1	YLR142W	1431 nt		5.23	□□□□□ -1.57
CAF16	P43569	RTK1	YDL025C	1863 nt		5.22	□□□□□ -1.57
CAF16	P43569	DBF4	YDR052C	2115 nt		5.22	□□□□□ -1.57
CAF16	P43569	YFR057W	YFR057W	456 nt		5.22	□□□□□ -1.57
CAF16	P43569	YGL230C	YGL230C	444 nt		5.22	□□□□□ -1.57
CAF16	P43569	EST3	YIL009C-A	546 nt		5.22	□□□□□ -1.57
CAF16	P43569	ECM9	YKR004C	1134 nt		5.22	□□□□□ -1.57
CAF16	P43569	CUS2	YNL286W	858 nt		5.22	□□□□□ -1.57
CAF16	P43569	ARG1	YOL058W	1263 nt		5.22	□□□□□ -1.57
CAF16	P43569	PLP2	YOR281C	861 nt		5.22	□□□□□ -1.57
CAF16	P43569	TAX4	YJL083W	1815 nt		5.22	□□□□□ -1.57
CAF16	P43569	GPB1	YOR371C	2694 nt		5.21	□□□□□ -1.57
CAF16	P43569	YJR061W	YJR061W	2808 nt		5.21	□□□□□ -1.57
CAF16	P43569	ARE2	YNR019W	1929 nt		5.21	□□□□□ -1.57
CAF16	P43569	POL31	YJR006W	1464 nt		5.21	□□□□□ -1.58
CAF16	P43569	NPY1	YGL067W	1155 nt		5.21	□□□□□ -1.58
CAF16	P43569	GCD7	YLR291C	1146 nt		5.21	□□□□□ -1.58
CAF16	P43569	IRC13	YOR235W	315 nt		5.21	□□□□□ -1.58
CAF16	P43569	RRS1	YOR294W	612 nt		5.21	□□□□□ -1.58
CAF16	P43569	SPE3	YPR069C	882 nt		5.21	□□□□□ -1.58
CAF16	P43569	UTP4	YDR324C	2331 nt		5.21	□□□□□ -1.58
CAF16	P43569	MSA1	YOR066W	1890 nt		5.21	□□□□□ -1.58
CAF16	P43569	BRE2	YLR015W	1518 nt		5.21	□□□□□ -1.58
CAF16	P43569	ENT2	YLR206W	1842 nt		5.2	□□□□□ -1.58
CAF16	P43569	IMG1	YCR046C	510 nt		5.2	□□□□□ -1.58
CAF16	P43569	YIL025C	YIL025C	375 nt		5.2	□□□□□ -1.58
CAF16	P43569	GTT1	YIR038C	705 nt		5.2	□□□□□ -1.58
CAF16	P43569	RFA3	YJL173C	369 nt		5.2	□□□□□ -1.58
CAF16	P43569	GAT3	YLR013W	426 nt		5.2	□□□□□ -1.58
CAF16	P43569	ELO3	YLR372W	1038 nt		5.2	□□□□□ -1.58
CAF16	P43569	YOR314W	YOR314W	330 nt		5.2	□□□□□ -1.58
CAF16	P43569	YMC1	YPR058W	924 nt		5.2	□□□□□ -1.58
CAF16	P43569	RCK2	YLR248W	1833 nt		5.2	□□□□□ -1.58
CAF16	P43569	ASF2	YDL197C	1578 nt		5.2	□□□□□ -1.58
CAF16	P43569	PRM7	YDL039C	2097 nt		5.19	□□□□□ -1.58
CAF16	P43569	PDC1	YLR044C	1692 nt		5.19	□□□□□ -1.58
CAF16	P43569	YEA4	YEL004W	1029 nt		5.19	□□□□□ -1.58
CAF16	P43569	YGL193C	YGL193C	312 nt		5.19	□□□□□ -1.58
CAF16	P43569	YGR111W	YGR111W	1203 nt		5.19	□□□□□ -1.58
CAF16	P43569	YIL163C	YIL163C	354 nt		5.19	□□□□□ -1.58
CAF16	P43569	PSF2	YJL072C	642 nt		5.19	□□□□□ -1.58
CAF16	P43569	LIA1	YJR070C	978 nt		5.19	□□□□□ -1.58
CAF16	P43569	YMR082C	YMR082C	357 nt		5.19	□□□□□ -1.58

Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms