Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SSR2P43308 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SSR2P43308 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.52■■□□□ 1.04
SSR2P43308 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.52■■□□□ 1.04
SSR2P43308 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSR2P43308 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SSR2P43308 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSR2P43308 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.52■■□□□ 1.04
SSR2P43308 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.52■■□□□ 1.03
SSR2P43308 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSR2P43308 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSR2P43308 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.51■■□□□ 1.03
SSR2P43308 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SSR2P43308 GUSBP5-201ENST00000418136 578 ntBASIC21.51■■□□□ 1.03
SSR2P43308 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.51■■□□□ 1.03
SSR2P43308 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.51■■□□□ 1.03
SSR2P43308 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.51■■□□□ 1.03
SSR2P43308 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSR2P43308 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSR2P43308 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.5■■□□□ 1.03
SSR2P43308 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSR2P43308 KRT16P3-201ENST00000439127 1283 ntBASIC21.5■■□□□ 1.03
SSR2P43308 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.5■■□□□ 1.03
SSR2P43308 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SSR2P43308 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.5■■□□□ 1.03
SSR2P43308 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SSR2P43308 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSR2P43308 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSR2P43308 ANOS2P-203ENST00000472227 1816 ntBASIC21.5■■□□□ 1.03
SSR2P43308 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSR2P43308 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSR2P43308 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSR2P43308 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSR2P43308 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SSR2P43308 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSR2P43308 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSR2P43308 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSR2P43308 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSR2P43308 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SSR2P43308 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSR2P43308 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSR2P43308 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.48■■□□□ 1.03
SSR2P43308 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSR2P43308 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.48■■□□□ 1.03
SSR2P43308 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SSR2P43308 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.48■■□□□ 1.03
SSR2P43308 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSR2P43308 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.48■■□□□ 1.03
SSR2P43308 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.48■■□□□ 1.03
SSR2P43308 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.48■■□□□ 1.03
SSR2P43308 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSR2P43308 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSR2P43308 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSR2P43308 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SSR2P43308 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSR2P43308 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
SSR2P43308 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SSR2P43308 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SSR2P43308 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SSR2P43308 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.46■■□□□ 1.03
SSR2P43308 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
SSR2P43308 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SSR2P43308 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSR2P43308 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
SSR2P43308 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SSR2P43308 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.46■■□□□ 1.03
SSR2P43308 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSR2P43308 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SSR2P43308 DUSP8P5-201ENST00000422884 1815 ntBASIC21.45■■□□□ 1.03
SSR2P43308 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.45■■□□□ 1.02
SSR2P43308 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SSR2P43308 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SSR2P43308 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SSR2P43308 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.45■■□□□ 1.02
SSR2P43308 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.45■■□□□ 1.02
SSR2P43308 MIR6724-1-201ENST00000616420 92 ntBASIC21.45■■□□□ 1.02
SSR2P43308 MIR6724-2-201ENST00000616483 92 ntBASIC21.45■■□□□ 1.02
SSR2P43308 MIR6724-4-201ENST00000617390 92 ntBASIC21.45■■□□□ 1.02
SSR2P43308 MIR6724-3-201ENST00000622482 92 ntBASIC21.45■■□□□ 1.02
SSR2P43308 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SSR2P43308 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SSR2P43308 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SSR2P43308 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SSR2P43308 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SSR2P43308 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SSR2P43308 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.44■■□□□ 1.02
SSR2P43308 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SSR2P43308 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SSR2P43308 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SSR2P43308 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.44■■□□□ 1.02
SSR2P43308 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
SSR2P43308 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.44■■□□□ 1.02
SSR2P43308 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SSR2P43308 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SSR2P43308 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SSR2P43308 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SSR2P43308 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.44■■□□□ 1.02
SSR2P43308 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.44■■□□□ 1.02
SSR2P43308 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.44■■□□□ 1.02
SSR2P43308 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms