Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SOX6P35712 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SOX6P35712 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX6P35712 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SOX6P35712 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX6P35712 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX6P35712 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
SOX6P35712 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SOX6P35712 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX6P35712 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SOX6P35712 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.2■□□□□ 0.82
SOX6P35712 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.2■□□□□ 0.82
SOX6P35712 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX6P35712 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX6P35712 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX6P35712 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.2■□□□□ 0.82
SOX6P35712 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOX6P35712 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.2■□□□□ 0.82
SOX6P35712 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX6P35712 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX6P35712 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX6P35712 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX6P35712 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX6P35712 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX6P35712 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SOX6P35712 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.19■□□□□ 0.82
SOX6P35712 AC148477.6-201ENST00000623746 465 ntBASIC20.19■□□□□ 0.82
SOX6P35712 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SOX6P35712 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SOX6P35712 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.19■□□□□ 0.82
SOX6P35712 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX6P35712 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SOX6P35712 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX6P35712 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.19■□□□□ 0.82
SOX6P35712 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.18■□□□□ 0.82
SOX6P35712 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SOX6P35712 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SOX6P35712 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.18■□□□□ 0.82
SOX6P35712 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SOX6P35712 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SOX6P35712 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX6P35712 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SOX6P35712 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SOX6P35712 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.18■□□□□ 0.82
SOX6P35712 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.18■□□□□ 0.82
SOX6P35712 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.18■□□□□ 0.82
SOX6P35712 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX6P35712 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX6P35712 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SOX6P35712 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SOX6P35712 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SOX6P35712 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SOX6P35712 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.17■□□□□ 0.82
SOX6P35712 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.17■□□□□ 0.82
SOX6P35712 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.17■□□□□ 0.82
SOX6P35712 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX6P35712 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX6P35712 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX6P35712 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.17■□□□□ 0.82
SOX6P35712 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.17■□□□□ 0.82
SOX6P35712 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.16■□□□□ 0.82
SOX6P35712 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.16■□□□□ 0.82
SOX6P35712 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOX6P35712 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SOX6P35712 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SOX6P35712 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.16■□□□□ 0.82
SOX6P35712 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOX6P35712 MIR3648-2-201ENST00000581792 180 ntBASIC20.16■□□□□ 0.82
SOX6P35712 MIR3648-1-201ENST00000615959 180 ntBASIC20.16■□□□□ 0.82
SOX6P35712 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.16■□□□□ 0.82
SOX6P35712 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOX6P35712 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOX6P35712 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOX6P35712 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.15■□□□□ 0.82
SOX6P35712 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SOX6P35712 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SOX6P35712 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.15■□□□□ 0.82
SOX6P35712 CR559946.2-201ENST00000623684 991 ntBASIC20.15■□□□□ 0.82
SOX6P35712 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX6P35712 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX6P35712 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX6P35712 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SOX6P35712 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX6P35712 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOX6P35712 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX6P35712 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
SOX6P35712 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX6P35712 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX6P35712 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX6P35712 ESRRAP2-201ENST00000418437 1549 ntBASIC20.14■□□□□ 0.81
SOX6P35712 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX6P35712 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX6P35712 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SOX6P35712 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOX6P35712 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
SOX6P35712 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX6P35712 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOX6P35712 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SOX6P35712 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.13■□□□□ 0.81
SOX6P35712 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms