Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SLC6A1P30531 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A1P30531 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.46■□□□□ 0.71
SLC6A1P30531 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC6A1P30531 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC6A1P30531 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC6A1P30531 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A1P30531 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A1P30531 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A1P30531 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A1P30531 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A1P30531 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A1P30531 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A1P30531 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC6A1P30531 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A1P30531 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SLC6A1P30531 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A1P30531 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A1P30531 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A1P30531 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC6A1P30531 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC6A1P30531 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A1P30531 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A1P30531 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC6A1P30531 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.44■□□□□ 0.7
SLC6A1P30531 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC6A1P30531 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.44■□□□□ 0.7
SLC6A1P30531 ESRRAP2-201ENST00000418437 1549 ntBASIC19.44■□□□□ 0.7
SLC6A1P30531 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A1P30531 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A1P30531 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A1P30531 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SLC6A1P30531 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A1P30531 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A1P30531 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC6A1P30531 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A1P30531 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A1P30531 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A1P30531 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A1P30531 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC6A1P30531 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A1P30531 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A1P30531 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A1P30531 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC6A1P30531 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SLC6A1P30531 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SLC6A1P30531 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A1P30531 ECEL1P2-201ENST00000461596 1295 ntBASIC19.42■□□□□ 0.7
SLC6A1P30531 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
SLC6A1P30531 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A1P30531 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A1P30531 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.42■□□□□ 0.7
SLC6A1P30531 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A1P30531 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A1P30531 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A1P30531 AC092296.2-201ENST00000589470 999 ntBASIC19.41■□□□□ 0.7
SLC6A1P30531 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A1P30531 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A1P30531 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A1P30531 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A1P30531 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A1P30531 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC6A1P30531 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC6A1P30531 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A1P30531 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC6A1P30531 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A1P30531 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.4■□□□□ 0.7
SLC6A1P30531 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A1P30531 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC6A1P30531 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SLC6A1P30531 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A1P30531 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A1P30531 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC6A1P30531 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC6A1P30531 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A1P30531 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A1P30531 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC6A1P30531 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A1P30531 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC6A1P30531 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SLC6A1P30531 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SLC6A1P30531 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC6A1P30531 C11orf96-202ENST00000528572 1834 ntBASIC19.38■□□□□ 0.69
SLC6A1P30531 NTF6A-201ENST00000591175 560 ntBASIC19.38■□□□□ 0.69
SLC6A1P30531 AC073130.3-201ENST00000624389 2278 ntBASIC19.38■□□□□ 0.69
SLC6A1P30531 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC6A1P30531 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A1P30531 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SLC6A1P30531 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC6A1P30531 FBXW4P1-201ENST00000426721 2239 ntBASIC19.37■□□□□ 0.69
SLC6A1P30531 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC6A1P30531 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A1P30531 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.37■□□□□ 0.69
SLC6A1P30531 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A1P30531 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SLC6A1P30531 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC6A1P30531 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A1P30531 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A1P30531 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SLC6A1P30531 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms