Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP24386 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP24386 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.03■□□□□ 0.96
CHMP24386 AF131216.4-201ENST00000638924 1588 ntBASIC21.03■□□□□ 0.96
CHMP24386 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP24386 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP24386 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP24386 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP24386 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP24386 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP24386 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP24386 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP24386 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP24386 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.02■□□□□ 0.96
CHMP24386 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP24386 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMP24386 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.02■□□□□ 0.96
CHMP24386 AL117328.2-201ENST00000624617 1940 ntBASIC21.02■□□□□ 0.95
CHMP24386 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP24386 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP24386 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP24386 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CHMP24386 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP24386 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CHMP24386 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP24386 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMP24386 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP24386 AC092028.1-203ENST00000608262 953 ntBASIC21.01■□□□□ 0.95
CHMP24386 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP24386 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP24386 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP24386 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP24386 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP24386 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21■□□□□ 0.95
CHMP24386 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP24386 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHMP24386 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21■□□□□ 0.95
CHMP24386 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP24386 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21■□□□□ 0.95
CHMP24386 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP24386 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP24386 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMP24386 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CHMP24386 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP24386 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP24386 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CHMP24386 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP24386 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP24386 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHMP24386 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.99■□□□□ 0.95
CHMP24386 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.98■□□□□ 0.95
CHMP24386 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP24386 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CHMP24386 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP24386 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP24386 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.98■□□□□ 0.95
CHMP24386 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.98■□□□□ 0.95
CHMP24386 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CHMP24386 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.98■□□□□ 0.95
CHMP24386 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CHMP24386 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMP24386 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP24386 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP24386 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP24386 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP24386 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP24386 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP24386 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
CHMP24386 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.97■□□□□ 0.95
CHMP24386 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.97■□□□□ 0.95
CHMP24386 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.97■□□□□ 0.95
CHMP24386 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.97■□□□□ 0.95
CHMP24386 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP24386 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP24386 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHMP24386 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.96■□□□□ 0.95
CHMP24386 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP24386 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.96■□□□□ 0.95
CHMP24386 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP24386 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.96■□□□□ 0.95
CHMP24386 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.96■□□□□ 0.95
CHMP24386 AL356441.2-201ENST00000443009 864 ntBASIC20.96■□□□□ 0.95
CHMP24386 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.96■□□□□ 0.95
CHMP24386 ANOS2P-203ENST00000472227 1816 ntBASIC20.96■□□□□ 0.95
CHMP24386 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.96■□□□□ 0.95
CHMP24386 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CHMP24386 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHMP24386 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CHMP24386 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP24386 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP24386 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP24386 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP24386 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.95■□□□□ 0.94
CHMP24386 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.95■□□□□ 0.94
CHMP24386 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CHMP24386 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.95■□□□□ 0.94
CHMP24386 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP24386 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP24386 AC233723.2-201ENST00000623798 2106 ntBASIC20.95■□□□□ 0.94
CHMP24386 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms