Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 IGF1R-204ENST00000558355 572 ntTSL 212.59□□□□□ -0.391e-6■■□□□ 13.7
SFPQP23246 ANKRD11-210ENST00000566858 580 ntTSL 417.9■□□□□ 0.469e-7■■□□□ 13.7
SFPQP23246 LARP4B-202ENST00000406525 681 ntTSL 530.14■■■□□ 2.421e-6■■□□□ 13.6
SFPQP23246 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.71e-6■■□□□ 13.6
SFPQP23246 LARP4B-207ENST00000476529 613 ntTSL 316.57■□□□□ 0.241e-6■■□□□ 13.6
SFPQP23246 LARP4B-208ENST00000481118 421 ntTSL 312.79□□□□□ -0.361e-6■■□□□ 13.6
SFPQP23246 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.192e-7■■□□□ 13.6
SFPQP23246 SNTB1-203ENST00000519177 1962 ntTSL 1 (best)21.1■□□□□ 0.972e-7■■□□□ 13.6
SFPQP23246 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.82e-7■■□□□ 13.6
SFPQP23246 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.82■□□□□ 0.283e-7■■□□□ 13.6
SFPQP23246 ARID1B-210ENST00000635849 5830 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.453e-7■■□□□ 13.6
SFPQP23246 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC13.81□□□□□ -0.27e-7■■□□□ 13.6
SFPQP23246 PLCB1-220ENST00000630757 857 ntTSL 36.64□□□□□ -1.352e-6■■□□□ 13.6
SFPQP23246 PLCB1-229ENST00000637204 100 ntTSL 52.96□□□□□ -1.942e-6■■□□□ 13.6
SFPQP23246 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC10.75□□□□□ -0.692e-7■■□□□ 13.6
SFPQP23246 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.322e-7■■□□□ 13.6
SFPQP23246 IGF1R-210ENST00000559925 2280 ntTSL 1 (best)16.96■□□□□ 0.312e-6■■□□□ 13.6
SFPQP23246 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.42e-6■■□□□ 13.6
SFPQP23246 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.892e-6■■□□□ 13.6
SFPQP23246 NFIA-214ENST00000496712 603 ntTSL 35.08□□□□□ -1.61e-6■■□□□ 13.6
SFPQP23246 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.44■■□□□ 1.662e-9■■□□□ 13.6
SFPQP23246 ERRFI1-205ENST00000487559 787 ntTSL 225.44■■□□□ 1.662e-9■■□□□ 13.6
SFPQP23246 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.38■■□□□ 1.652e-9■■□□□ 13.6
SFPQP23246 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.462e-9■■□□□ 13.6
SFPQP23246 MATR3-225ENST00000514528 532 ntTSL 419.04■□□□□ 0.642e-6■■□□□ 13.6
SFPQP23246 MATR3-213ENST00000508689 561 ntTSL 418.13■□□□□ 0.492e-6■■□□□ 13.6
SFPQP23246 MATR3-210ENST00000504643 2560 ntTSL 28.76□□□□□ -1.012e-6■■□□□ 13.6
SFPQP23246 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.81■□□□□ 0.768e-7■■□□□ 13.6
SFPQP23246 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.62■□□□□ 0.418e-7■■□□□ 13.6
SFPQP23246 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.759e-8■■□□□ 13.5
SFPQP23246 PLEKHA1-206ENST00000463663 617 ntTSL 527.41■■□□□ 1.982e-6■■□□□ 13.5
SFPQP23246 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.5■■□□□ 1.359e-8■■□□□ 13.5
SFPQP23246 PLEKHA1-208ENST00000494222 603 ntTSL 322.69■■□□□ 1.222e-6■■□□□ 13.5
SFPQP23246 TNK2-216ENST00000468819 876 ntTSL 1 (best)22.59■■□□□ 1.219e-8■■□□□ 13.5
SFPQP23246 RRBP1-209ENST00000495501 832 ntTSL 522.56■■□□□ 1.22e-7■■□□□ 13.5
SFPQP23246 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.359e-8■■□□□ 13.5
SFPQP23246 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.042e-7■■□□□ 13.5
SFPQP23246 RRBP1-210ENST00000610403 3309 ntTSL 5 BASIC13.49□□□□□ -0.252e-7■■□□□ 13.5
SFPQP23246 PLEKHA1-202ENST00000368989 3771 ntTSL 5 BASIC12.35□□□□□ -0.432e-6■■□□□ 13.5
SFPQP23246 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.342e-6■■□□□ 13.5
SFPQP23246 PTMA-208ENST00000448874 1108 ntTSL 218.67■□□□□ 0.583e-7■■□□□ 13.5
SFPQP23246 PTMA-212ENST00000481928 1635 ntTSL 318.41■□□□□ 0.543e-7■■□□□ 13.5
SFPQP23246 PTMA-211ENST00000468027 621 ntTSL 1 (best)14.43□□□□□ -0.13e-7■■□□□ 13.5
SFPQP23246 PTMA-209ENST00000466801 784 ntTSL 511.97□□□□□ -0.493e-7■■□□□ 13.5
SFPQP23246 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC11.68□□□□□ -0.543e-7■■□□□ 13.5
SFPQP23246 PTMA-203ENST00000409321 735 ntTSL 3 BASIC11.44□□□□□ -0.583e-7■■□□□ 13.5
SFPQP23246 PTMA-201ENST00000341369 1212 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.63e-7■■□□□ 13.5
SFPQP23246 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.73e-7■■□□□ 13.5
SFPQP23246 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.56■□□□□ 0.081e-6■■□□□ 13.5
SFPQP23246 LYRM4-204ENST00000463032 1487 ntTSL 1 (best)14.85□□□□□ -0.031e-6■■□□□ 13.5
SFPQP23246 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC13.46□□□□□ -0.261e-6■■□□□ 13.5
SFPQP23246 LYRM4-207ENST00000480566 941 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.691e-6■■□□□ 13.5
SFPQP23246 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.781e-6■■□□□ 13.5
SFPQP23246 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.396e-7■■□□□ 13.5
SFPQP23246 DLC1-212ENST00000515225 582 ntTSL 323.1■■□□□ 1.296e-6■■□□□ 13.5
SFPQP23246 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.816e-6■■□□□ 13.5
SFPQP23246 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.39e-7■■□□□ 13.5
SFPQP23246 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.949e-7■■□□□ 13.5
SFPQP23246 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.889e-7■■□□□ 13.5
SFPQP23246 ARID1B-205ENST00000414678 6528 ntAPPRIS ALT2 TSL 510.41□□□□□ -0.749e-7■■□□□ 13.5
SFPQP23246 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.722e-6■■□□□ 13.5
SFPQP23246 UBAP2L-209ENST00000437652 911 ntTSL 329.29■■■□□ 2.282e-6■■□□□ 13.5
SFPQP23246 UBAP2L-205ENST00000412596 980 ntTSL 528.93■■■□□ 2.222e-6■■□□□ 13.5
SFPQP23246 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.672e-6■■□□□ 13.5
SFPQP23246 TFEB-213ENST00000425401 281 ntTSL 1 (best)24.65■■□□□ 1.542e-6■■□□□ 13.5
SFPQP23246 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC22.41■■□□□ 1.182e-6■■□□□ 13.5
SFPQP23246 TFEB-208ENST00000416140 1022 ntTSL 521.96■■□□□ 1.112e-6■■□□□ 13.5
SFPQP23246 KIF2A-207ENST00000509663 759 ntTSL 321.88■■□□□ 1.092e-6■■□□□ 13.5
SFPQP23246 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.4■■□□□ 1.022e-6■■□□□ 13.5
SFPQP23246 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.922e-6■■□□□ 13.5
SFPQP23246 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.92e-6■■□□□ 13.5
SFPQP23246 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.11■□□□□ 0.812e-6■■□□□ 13.5
SFPQP23246 UBAP2L-211ENST00000456325 812 ntTSL 319.58■□□□□ 0.722e-6■■□□□ 13.5
SFPQP23246 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.72e-6■■□□□ 13.5
SFPQP23246 TFEB-209ENST00000419396 914 ntTSL 519.35■□□□□ 0.692e-6■■□□□ 13.5
SFPQP23246 UBAP2L-210ENST00000441890 678 ntTSL 219.29■□□□□ 0.682e-6■■□□□ 13.5
SFPQP23246 DAPK1-206ENST00000469067 2499 ntTSL 219.24■□□□□ 0.672e-6■■□□□ 13.5
SFPQP23246 MAD1L1-212ENST00000450235 850 ntTSL 319.07■□□□□ 0.642e-6■■□□□ 13.5
SFPQP23246 KIF2A-209ENST00000512541 549 ntTSL 418.9■□□□□ 0.622e-6■■□□□ 13.5
SFPQP23246 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.36■□□□□ 0.532e-6■■□□□ 13.5
SFPQP23246 TBX2-AS1-201ENST00000586706 476 ntTSL 318.24■□□□□ 0.512e-6■■□□□ 13.5
SFPQP23246 DAPK1-217ENST00000496522 579 ntTSL 217.62■□□□□ 0.412e-6■■□□□ 13.5
SFPQP23246 TFEB-212ENST00000424495 377 ntTSL 1 (best)16.76■□□□□ 0.272e-6■■□□□ 13.5
SFPQP23246 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.55■□□□□ 0.242e-6■■□□□ 13.5
SFPQP23246 DAPK1-210ENST00000472344 548 ntTSL 516.19■□□□□ 0.182e-6■■□□□ 13.5
SFPQP23246 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC16.13■□□□□ 0.172e-6■■□□□ 13.5
SFPQP23246 IGF2BP1-206ENST00000515586 768 ntTSL 316.03■□□□□ 0.162e-6■■□□□ 13.5
SFPQP23246 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.122e-6■■□□□ 13.5
SFPQP23246 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.072e-6■■□□□ 13.5
SFPQP23246 UBAP2L-204ENST00000368504 1120 ntTSL 515.49■□□□□ 0.072e-6■■□□□ 13.5
SFPQP23246 TBC1D8-209ENST00000487392 373 ntTSL 515.3■□□□□ 0.042e-6■■□□□ 13.5
SFPQP23246 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.032e-6■■□□□ 13.5
SFPQP23246 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.112e-6■■□□□ 13.5
SFPQP23246 IMMP2L-210ENST00000492938 587 ntTSL 314.03□□□□□ -0.162e-6■■□□□ 13.5
SFPQP23246 DAPK1-213ENST00000491893 4186 ntTSL 1 (best) BASIC13.98□□□□□ -0.172e-6■■□□□ 13.5
SFPQP23246 IGF2BP1-203ENST00000499130 568 ntTSL 313.95□□□□□ -0.182e-6■■□□□ 13.5
SFPQP23246 TFEB-214ENST00000433032 168 ntTSL 1 (best)13.89□□□□□ -0.192e-6■■□□□ 13.5
SFPQP23246 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC13.56□□□□□ -0.242e-6■■□□□ 13.5
SFPQP23246 DAPK1-219ENST00000622514 5772 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.272e-6■■□□□ 13.5
SFPQP23246 DAPK1-209ENST00000472284 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.32e-6■■□□□ 13.5
Retrieved 100 of 4,991 protein–RNA pairs in 117.5 ms