Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF1BP20333 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFRSF1BP20333 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF1BP20333 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF1BP20333 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF1BP20333 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF1BP20333 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF1BP20333 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF1BP20333 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF1BP20333 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF1BP20333 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF1BP20333 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF1BP20333 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFRSF1BP20333 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
TNFRSF1BP20333 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.95■□□□□ 0.94
TNFRSF1BP20333 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF1BP20333 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF1BP20333 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF1BP20333 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF1BP20333 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TNFRSF1BP20333 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF1BP20333 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
TNFRSF1BP20333 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.95■□□□□ 0.94
TNFRSF1BP20333 AC139795.1-202ENST00000500444 432 ntBASIC20.95■□□□□ 0.94
TNFRSF1BP20333 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.95■□□□□ 0.94
TNFRSF1BP20333 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TNFRSF1BP20333 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF1BP20333 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFRSF1BP20333 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.95■□□□□ 0.94
TNFRSF1BP20333 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF1BP20333 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TNFRSF1BP20333 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF1BP20333 LINC00565-201ENST00000562710 2331 ntBASIC20.94■□□□□ 0.94
TNFRSF1BP20333 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF1BP20333 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.94■□□□□ 0.94
TNFRSF1BP20333 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF1BP20333 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TNFRSF1BP20333 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF1BP20333 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF1BP20333 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF1BP20333 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF1BP20333 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFRSF1BP20333 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TNFRSF1BP20333 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF1BP20333 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF1BP20333 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF1BP20333 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF1BP20333 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF1BP20333 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF1BP20333 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.93■□□□□ 0.94
TNFRSF1BP20333 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.93■□□□□ 0.94
TNFRSF1BP20333 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.93■□□□□ 0.94
TNFRSF1BP20333 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF1BP20333 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF1BP20333 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TNFRSF1BP20333 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.92■□□□□ 0.94
TNFRSF1BP20333 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TNFRSF1BP20333 GUSBP5-202ENST00000510805 1989 ntBASIC20.92■□□□□ 0.94
TNFRSF1BP20333 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TNFRSF1BP20333 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFRSF1BP20333 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFRSF1BP20333 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.92■□□□□ 0.94
TNFRSF1BP20333 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFRSF1BP20333 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
TNFRSF1BP20333 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFRSF1BP20333 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.91■□□□□ 0.94
TNFRSF1BP20333 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TNFRSF1BP20333 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFRSF1BP20333 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFRSF1BP20333 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFRSF1BP20333 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.91■□□□□ 0.94
TNFRSF1BP20333 AC120024.1-201ENST00000562672 995 ntBASIC20.91■□□□□ 0.94
TNFRSF1BP20333 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TNFRSF1BP20333 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFRSF1BP20333 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFRSF1BP20333 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFRSF1BP20333 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TNFRSF1BP20333 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.9■□□□□ 0.94
TNFRSF1BP20333 AC019171.1-201ENST00000601251 1056 ntBASIC20.9■□□□□ 0.94
TNFRSF1BP20333 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TNFRSF1BP20333 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TNFRSF1BP20333 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
TNFRSF1BP20333 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TNFRSF1BP20333 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
TNFRSF1BP20333 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TNFRSF1BP20333 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFRSF1BP20333 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFRSF1BP20333 ABHD17AP5-201ENST00000580133 923 ntBASIC20.89■□□□□ 0.93
TNFRSF1BP20333 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.89■□□□□ 0.93
TNFRSF1BP20333 PVT1_1.1-201ENST00000615125 194 ntBASIC20.89■□□□□ 0.93
TNFRSF1BP20333 AC079630.1-202ENST00000618127 1840 ntBASIC20.89■□□□□ 0.93
TNFRSF1BP20333 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.89■□□□□ 0.93
TNFRSF1BP20333 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.89■□□□□ 0.93
TNFRSF1BP20333 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFRSF1BP20333 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFRSF1BP20333 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFRSF1BP20333 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.88■□□□□ 0.93
TNFRSF1BP20333 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFRSF1BP20333 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
TNFRSF1BP20333 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms