Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.81■□□□□ 0.92
UBL4AP11441 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBL4AP11441 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBL4AP11441 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBL4AP11441 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.81■□□□□ 0.92
UBL4AP11441 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBL4AP11441 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBL4AP11441 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBL4AP11441 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
UBL4AP11441 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBL4AP11441 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.81■□□□□ 0.92
UBL4AP11441 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.81■□□□□ 0.92
UBL4AP11441 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBL4AP11441 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBL4AP11441 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBL4AP11441 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.81■□□□□ 0.92
UBL4AP11441 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UBL4AP11441 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBL4AP11441 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBL4AP11441 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBL4AP11441 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
UBL4AP11441 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.8■□□□□ 0.92
UBL4AP11441 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBL4AP11441 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UBL4AP11441 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.8■□□□□ 0.92
UBL4AP11441 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBL4AP11441 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBL4AP11441 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBL4AP11441 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
UBL4AP11441 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBL4AP11441 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.79■□□□□ 0.92
UBL4AP11441 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBL4AP11441 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
UBL4AP11441 MIR6722-201ENST00000617286 78 ntBASIC20.79■□□□□ 0.92
UBL4AP11441 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBL4AP11441 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBL4AP11441 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBL4AP11441 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBL4AP11441 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
UBL4AP11441 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBL4AP11441 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBL4AP11441 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
UBL4AP11441 MTDHP2-201ENST00000601468 714 ntBASIC20.78■□□□□ 0.92
UBL4AP11441 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.78■□□□□ 0.92
UBL4AP11441 AL035685.1-201ENST00000636663 812 ntBASIC20.78■□□□□ 0.92
UBL4AP11441 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBL4AP11441 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBL4AP11441 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBL4AP11441 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBL4AP11441 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
UBL4AP11441 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.77■□□□□ 0.92
UBL4AP11441 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
UBL4AP11441 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBL4AP11441 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.77■□□□□ 0.92
UBL4AP11441 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
UBL4AP11441 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBL4AP11441 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.77■□□□□ 0.91
UBL4AP11441 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.77■□□□□ 0.91
UBL4AP11441 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
UBL4AP11441 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
UBL4AP11441 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
UBL4AP11441 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.76■□□□□ 0.91
UBL4AP11441 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
UBL4AP11441 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBL4AP11441 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBL4AP11441 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
UBL4AP11441 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
UBL4AP11441 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
UBL4AP11441 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.76■□□□□ 0.91
UBL4AP11441 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.76■□□□□ 0.91
UBL4AP11441 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBL4AP11441 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBL4AP11441 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBL4AP11441 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBL4AP11441 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBL4AP11441 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
UBL4AP11441 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBL4AP11441 TSPY9P-201ENST00000440215 945 ntBASIC20.75■□□□□ 0.91
UBL4AP11441 TSPY11P-201ENST00000442607 1045 ntBASIC20.75■□□□□ 0.91
UBL4AP11441 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBL4AP11441 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBL4AP11441 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBL4AP11441 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBL4AP11441 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBL4AP11441 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
UBL4AP11441 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBL4AP11441 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
UBL4AP11441 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.74■□□□□ 0.91
UBL4AP11441 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBL4AP11441 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.74■□□□□ 0.91
UBL4AP11441 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.74■□□□□ 0.91
UBL4AP11441 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
UBL4AP11441 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBL4AP11441 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBL4AP11441 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.74■□□□□ 0.91
UBL4AP11441 AC005703.6-201ENST00000623265 1329 ntBASIC20.74■□□□□ 0.91
UBL4AP11441 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBL4AP11441 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UBL4AP11441 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.73■□□□□ 0.91
UBL4AP11441 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms