Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 LONRF2P2-201ENST00000439212 571 ntBASIC19.43■□□□□ 0.7
UBBP0CG47 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBBP0CG47 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.43■□□□□ 0.7
UBBP0CG47 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBBP0CG47 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBBP0CG47 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.43■□□□□ 0.7
UBBP0CG47 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBBP0CG47 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBBP0CG47 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.42■□□□□ 0.7
UBBP0CG47 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBBP0CG47 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
UBBP0CG47 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBBP0CG47 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBBP0CG47 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBBP0CG47 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBBP0CG47 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.42■□□□□ 0.7
UBBP0CG47 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBBP0CG47 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBBP0CG47 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBBP0CG47 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBBP0CG47 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.42■□□□□ 0.7
UBBP0CG47 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBBP0CG47 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBBP0CG47 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBBP0CG47 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBBP0CG47 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBBP0CG47 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBBP0CG47 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBBP0CG47 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBBP0CG47 ALDH1A3-203ENST00000557963 1670 ntBASIC19.41■□□□□ 0.7
UBBP0CG47 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBBP0CG47 DUX4L9-201ENST00000449051 1259 ntBASIC19.41■□□□□ 0.7
UBBP0CG47 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.41■□□□□ 0.7
UBBP0CG47 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.41■□□□□ 0.7
UBBP0CG47 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBBP0CG47 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.41■□□□□ 0.7
UBBP0CG47 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBBP0CG47 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBBP0CG47 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBBP0CG47 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
UBBP0CG47 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBBP0CG47 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.4■□□□□ 0.7
UBBP0CG47 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.4■□□□□ 0.7
UBBP0CG47 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBBP0CG47 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBBP0CG47 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBBP0CG47 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.4■□□□□ 0.7
UBBP0CG47 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBBP0CG47 EP400NL-214ENST00000641289 2402 ntBASIC19.4■□□□□ 0.7
UBBP0CG47 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBBP0CG47 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.4■□□□□ 0.7
UBBP0CG47 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
UBBP0CG47 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
UBBP0CG47 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBBP0CG47 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
UBBP0CG47 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBBP0CG47 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
UBBP0CG47 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
UBBP0CG47 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBBP0CG47 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.39■□□□□ 0.69
UBBP0CG47 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBBP0CG47 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBBP0CG47 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
UBBP0CG47 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.39■□□□□ 0.69
UBBP0CG47 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBBP0CG47 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBBP0CG47 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
UBBP0CG47 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.38■□□□□ 0.69
UBBP0CG47 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBBP0CG47 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBBP0CG47 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
UBBP0CG47 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBBP0CG47 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBBP0CG47 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
UBBP0CG47 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBBP0CG47 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
UBBP0CG47 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBBP0CG47 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.38■□□□□ 0.69
UBBP0CG47 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.38■□□□□ 0.69
UBBP0CG47 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
UBBP0CG47 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.38■□□□□ 0.69
UBBP0CG47 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBBP0CG47 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBBP0CG47 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBBP0CG47 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBBP0CG47 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBBP0CG47 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBBP0CG47 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBBP0CG47 AC131274.2-201ENST00000580697 1507 ntBASIC19.37■□□□□ 0.69
UBBP0CG47 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
UBBP0CG47 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
UBBP0CG47 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
UBBP0CG47 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBBP0CG47 AC022616.5-201ENST00000518796 181 ntBASIC19.37■□□□□ 0.69
UBBP0CG47 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
UBBP0CG47 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.37■□□□□ 0.69
UBBP0CG47 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBBP0CG47 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBBP0CG47 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBBP0CG47 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms