Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
WNT1P04628 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
WNT1P04628 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.33■■□□□ 1.17
WNT1P04628 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.33■■□□□ 1.17
WNT1P04628 AL162430.1-201ENST00000480705 870 ntBASIC22.33■■□□□ 1.17
WNT1P04628 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.33■■□□□ 1.17
WNT1P04628 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
WNT1P04628 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
WNT1P04628 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.33■■□□□ 1.17
WNT1P04628 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.33■■□□□ 1.17
WNT1P04628 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
WNT1P04628 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.33■■□□□ 1.16
WNT1P04628 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
WNT1P04628 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
WNT1P04628 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
WNT1P04628 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
WNT1P04628 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.32■■□□□ 1.16
WNT1P04628 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.32■■□□□ 1.16
WNT1P04628 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.32■■□□□ 1.16
WNT1P04628 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.32■■□□□ 1.16
WNT1P04628 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.32■■□□□ 1.16
WNT1P04628 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
WNT1P04628 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
WNT1P04628 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.31■■□□□ 1.16
WNT1P04628 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
WNT1P04628 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
WNT1P04628 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.31■■□□□ 1.16
WNT1P04628 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
WNT1P04628 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
WNT1P04628 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
WNT1P04628 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
WNT1P04628 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
WNT1P04628 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
WNT1P04628 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
WNT1P04628 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.3■■□□□ 1.16
WNT1P04628 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.3■■□□□ 1.16
WNT1P04628 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.3■■□□□ 1.16
WNT1P04628 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
WNT1P04628 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
WNT1P04628 AC022211.4-201ENST00000625094 2161 ntBASIC22.29■■□□□ 1.16
WNT1P04628 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
WNT1P04628 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
WNT1P04628 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
WNT1P04628 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
WNT1P04628 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
WNT1P04628 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
WNT1P04628 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
WNT1P04628 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
WNT1P04628 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
WNT1P04628 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.28■■□□□ 1.16
WNT1P04628 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.28■■□□□ 1.16
WNT1P04628 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.28■■□□□ 1.16
WNT1P04628 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
WNT1P04628 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
WNT1P04628 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
WNT1P04628 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
WNT1P04628 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.28■■□□□ 1.16
WNT1P04628 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.27■■□□□ 1.16
WNT1P04628 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.27■■□□□ 1.16
WNT1P04628 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.27■■□□□ 1.16
WNT1P04628 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
WNT1P04628 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.27■■□□□ 1.16
WNT1P04628 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.27■■□□□ 1.16
WNT1P04628 AC141586.4-201ENST00000624558 1573 ntBASIC22.27■■□□□ 1.16
WNT1P04628 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
WNT1P04628 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
WNT1P04628 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.26■■□□□ 1.15
WNT1P04628 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
WNT1P04628 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
WNT1P04628 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
WNT1P04628 SLC47A1P1-202ENST00000449666 945 ntBASIC22.25■■□□□ 1.15
WNT1P04628 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.25■■□□□ 1.15
WNT1P04628 AC126544.1-201ENST00000580842 1059 ntBASIC22.25■■□□□ 1.15
WNT1P04628 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.25■■□□□ 1.15
WNT1P04628 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
WNT1P04628 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
WNT1P04628 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
WNT1P04628 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
WNT1P04628 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.24■■□□□ 1.15
WNT1P04628 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
WNT1P04628 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
WNT1P04628 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
WNT1P04628 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
WNT1P04628 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
WNT1P04628 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
WNT1P04628 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.24■■□□□ 1.15
WNT1P04628 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
WNT1P04628 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.23■■□□□ 1.15
WNT1P04628 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
WNT1P04628 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.23■■□□□ 1.15
WNT1P04628 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.23■■□□□ 1.15
WNT1P04628 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.23■■□□□ 1.15
WNT1P04628 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
WNT1P04628 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
WNT1P04628 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
WNT1P04628 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
WNT1P04628 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
WNT1P04628 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.23■■□□□ 1.15
WNT1P04628 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.23■■□□□ 1.15
WNT1P04628 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms