Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LCATP04180 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCATP04180 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LCATP04180 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LCATP04180 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.68■□□□□ 0.74
LCATP04180 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LCATP04180 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCATP04180 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LCATP04180 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCATP04180 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCATP04180 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCATP04180 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LCATP04180 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.67■□□□□ 0.74
LCATP04180 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCATP04180 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.67■□□□□ 0.74
LCATP04180 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.67■□□□□ 0.74
LCATP04180 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCATP04180 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LCATP04180 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCATP04180 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.67■□□□□ 0.74
LCATP04180 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.67■□□□□ 0.74
LCATP04180 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LCATP04180 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.67■□□□□ 0.74
LCATP04180 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
LCATP04180 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LCATP04180 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LCATP04180 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.67■□□□□ 0.74
LCATP04180 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
LCATP04180 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.66■□□□□ 0.74
LCATP04180 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCATP04180 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LCATP04180 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCATP04180 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LCATP04180 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.66■□□□□ 0.74
LCATP04180 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.66■□□□□ 0.74
LCATP04180 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LCATP04180 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCATP04180 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LCATP04180 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LCATP04180 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCATP04180 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LCATP04180 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCATP04180 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCATP04180 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCATP04180 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCATP04180 Z92544.1-202ENST00000571933 1220 ntBASIC19.65■□□□□ 0.74
LCATP04180 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LCATP04180 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.65■□□□□ 0.74
LCATP04180 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCATP04180 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LCATP04180 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
LCATP04180 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCATP04180 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LCATP04180 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LCATP04180 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
LCATP04180 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LCATP04180 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
LCATP04180 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LCATP04180 AC239859.2-201ENST00000444165 318 ntBASIC19.64■□□□□ 0.73
LCATP04180 AC009299.2-201ENST00000482477 511 ntBASIC19.64■□□□□ 0.73
LCATP04180 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LCATP04180 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LCATP04180 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.64■□□□□ 0.73
LCATP04180 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LCATP04180 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.64■□□□□ 0.73
LCATP04180 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LCATP04180 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LCATP04180 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.63■□□□□ 0.73
LCATP04180 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LCATP04180 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LCATP04180 AL451085.2-201ENST00000605085 799 ntBASIC19.63■□□□□ 0.73
LCATP04180 MIR4787-201ENST00000607364 84 ntBASIC19.63■□□□□ 0.73
LCATP04180 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.63■□□□□ 0.73
LCATP04180 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LCATP04180 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LCATP04180 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LCATP04180 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.62■□□□□ 0.73
LCATP04180 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.62■□□□□ 0.73
LCATP04180 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.62■□□□□ 0.73
LCATP04180 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LCATP04180 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LCATP04180 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LCATP04180 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LCATP04180 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.62■□□□□ 0.73
LCATP04180 AC092028.1-203ENST00000608262 953 ntBASIC19.62■□□□□ 0.73
LCATP04180 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
LCATP04180 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LCATP04180 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.62■□□□□ 0.73
LCATP04180 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
LCATP04180 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.62■□□□□ 0.73
LCATP04180 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LCATP04180 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LCATP04180 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LCATP04180 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LCATP04180 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LCATP04180 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LCATP04180 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LCATP04180 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LCATP04180 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.61■□□□□ 0.73
LCATP04180 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms